RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GTPBP3Q969Y2 492 aaKnown RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZNF669Q96BR6 464 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 MUC3BQ9H195 1237 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 SOX17Q9H6I2 414 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 CBX8Q9HC52 389 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 MSRB2Q9Y3D2 182 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 J3QW42 95 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 CDC45O75419 566 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 PAGE1O75459 146 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 ATE1O95260 518 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 BMP6P22004 513 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 CASP7P55210 303 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 ATP11AP98196 1134 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 IKBKEQ14164 716 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 BNC2Q6ZN30 1099 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 RAB44Q7Z6P3 723 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 SYNPOQ8N3V7 929 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 SLC16A10Q8TF71 515 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 WNT8BQ93098 351 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 IGFLR1Q9H665 355 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 EHMT1Q9H9B1 1298 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 PPT2Q9UMR5 302 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 NOP58Q9Y2X3 529 aaKnown RBP6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 KDM2BQ8NHM5 1336 aa6.5□□□□□ -1.37
HMGB1P23-201ENST00000518743 KAT6BQ8WYB5 2073 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 CDC42BPGQ6DT37 1551 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 KIF15Q9NS87 1388 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZBTB42B2RXF5 422 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 PDPK1O15530 556 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 TRPA1O75762 1119 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 CYP11A1P05108 521 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 BMP4P12644 408 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 ADH6P28332 368 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 TBC1D8BQ0IIM8 1120 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 FAM117BQ6P1L5 589 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 CCDC81Q6ZN84 652 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 RNPC3Q96LT9 517 aaKnown RBP6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 HHIPQ96QV1 700 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 TM9SF2Q99805 663 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 RRAGCQ9HB90 399 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 METTL14Q9HCE5 456 aaKnown RBP6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 TACC3Q9Y6A5 838 aa6.49□□□□□ -1.37
HMGB1P23-201ENST00000518743 A0A0C4DFX4 3053 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 TERTO14746 1132 aaKnown RBP6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 DNAJC6O75061 913 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 WFS1O76024 890 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 ARAFP10398 606 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 HSPA8P11142 646 aaKnown RBP6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 CDC27P30260 824 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 CHRNA2Q15822 529 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 HABP4Q5JVS0 413 aaKnown RBP6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 GK5Q6ZS86 529 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 TCP11L2Q8N4U5 519 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 BRMS1Q9HCU9 246 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 SLC6A14Q9UN76 642 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 PCDHB5Q9Y5E4 795 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 IGSF1Q8N6C5 1336 aa6.48□□□□□ -1.37
HMGB1P23-201ENST00000518743 KCPQ6ZWJ8 1503 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 H3BRJ5 948 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 ESRRAP11474 423 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 CPB1P15086 417 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 ALAS2P22557 587 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 MAP2K3P46734 347 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 SOX10P56693 466 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 MSL1Q68DK7 614 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 SV2AQ7L0J3 742 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 VN1R5Q7Z5H4 357 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 TAB3Q8N5C8 712 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 DCAF11Q8TEB1 546 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 ERBINQ96RT1 1412 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 PEAK1Q9H792 1746 aa6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 PARP4Q9UKK3 1724 aaKnown RBP6.47□□□□□ -1.37
HMGB1P23-201ENST00000518743 TNRC6CQ9HCJ0 1690 aaKnown RBP6.46□□□□□ -1.37
HMGB1P23-201ENST00000518743 HFM1A2PYH4 1435 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 GSTP1P09211 210 aaKnown RBP6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 ADH7P40394 386 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZNF157P51786 506 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 PDE4BQ07343 736 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZNF252P-AS1Q0IIN9 211 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 SEPT6Q14141 434 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 COL24A1Q17RW2 1714 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZNF423Q2M1K9 1284 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZC3H12BQ5HYM0 836 aaKnown RBP6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 LSRQ86X29 649 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms