RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 ERICH2A1L162 156 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 RPS6KB1P23443 525 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 LIFRP42702 1097 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 TM4SF4P48230 202 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 MTMR2Q13614 643 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 DNAJC5GQ8N7S2 189 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 EMILIN3Q9NT22 766 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
IGKV1-35-201ENST00000517744 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 SH2B2O14492 632 aaPredicted RBP12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 HMGCS2P54868 508 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 CCL15Q16663 113 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 FEZ1Q99689 392 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 LY9Q9HBG7 655 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.37
IGKV1-35-201ENST00000517744 F5H6K3 240 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 ATP2B2Q01814 1243 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 KLRC3Q07444 240 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 WTAPQ15007 396 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 GMCL1Q96IK5 515 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 KIF2CQ99661 725 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 KAT14Q9H8E8 782 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
IGKV1-35-201ENST00000517744 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 AOC2O75106 756 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 SNHG28P0DPA3 235 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 VCAM1P19320 739 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 ZIC5Q96T25 663 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 PTPN18Q99952 460 aa12.75□□□□□ -0.37
IGKV1-35-201ENST00000517744 BTBD19C9JJ37 291 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 PLA2G6O60733 806 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 NDUFB10O96000 172 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 RCAN1P53805 252 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 EVCP57679 992 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 OTUD7BQ6GQQ9 843 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
IGKV1-35-201ENST00000517744 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 DDAH1O94760 285 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 PDHBP11177 359 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 CPA1P15085 419 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 TROAPQ12815 778 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 GRM1Q13255 1194 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 RABEP1Q15276 862 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 TREML2Q5T2D2 321 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 Q6ZUG5 572 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 CFHR5Q9BXR6 569 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 UPF3BQ9BZI7 483 aaKnown RBP12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
IGKV1-35-201ENST00000517744 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms