RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 RAD21O60216 631 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 OSBPP22059 807 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 C17orf99Q6UX52 265 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 P2RX7Q99572 595 aaKnown RBP17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 LAMB1P07942 1786 aa17.24■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 FKTNO75072 461 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 KDM4AO75164 1064 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 TTLL1O95922 423 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 SOX10P56693 466 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 PABPC4Q13310 644 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 STOX1Q6ZVD7 989 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 ESR2Q92731 530 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 MKL1Q969V6 931 aa17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
SCARNA21-201ENST00000517026 SLC27A2O14975 620 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 PEX10O60683 326 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 CAP1Q01518 475 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 CATSPERGQ6ZRH7 1159 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 SMCR8Q8TEV9 937 aaPredicted RBP17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
SCARNA21-201ENST00000517026 E7EWF7 191 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 F5H6K3 240 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 NDUFB10O96000 172 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 SP3Q02447 781 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 KLRC3Q07444 240 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 POTEEQ6S8J3 1075 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 LPAR1Q92633 364 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 KRT23Q9C075 422 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 ZSWIM5Q9P217 1185 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
SCARNA21-201ENST00000517026 BCRP11274 1271 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 NOVP48745 357 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 HERVK_113P62684 666 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 CTU1Q7Z7A3 348 aaKnown RBP17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 CD99L2Q8TCZ2 262 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 TANGO6Q9C0B7 1094 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 CNNM2Q9H8M5 875 aa17.2■□□□□ 0.34
SCARNA21-201ENST00000517026 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 SLFN13Q68D06 897 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 ARHGAP39Q9C0H5 1083 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 MTMR7Q9Y216 660 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 CENPFP49454 3210 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 PTPRFP10586 1907 aa17.19■□□□□ 0.34
SCARNA21-201ENST00000517026 GREB1LQ9C091 1923 aaPredicted RBP17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 TRDNQ13061 729 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 RASGRP2Q7LDG7 609 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 RBPJLQ9UBG7 517 aa17.18■□□□□ 0.34
SCARNA21-201ENST00000517026 LOC285556D6RIA3 1793 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 FLOT1O75955 427 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 MCCP23508 829 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 CTGFP29279 349 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 GCLCP48506 637 aaPredicted RBP17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 LACTBP83111 547 aaPredicted RBP17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 COG2Q14746 738 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 ERO1AQ96HE7 468 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
SCARNA21-201ENST00000517026 SYNPO2Q9UMS6 1093 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms