RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 USP17L18D6R9N7 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L22D6RA61 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L17D6RBQ6 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L19D6RCP7 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L20D6RJB6 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 F5H6K3 240 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SMIM22K7EJ46 135 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IRF6O14896 467 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BMP3P12645 472 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RPS6KB1P23443 525 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 VEGFBP49765 207 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GNAQP50148 359 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 HTRA3P83110 453 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MAP2K1Q02750 393 aaPredicted RBP6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KLRC3Q07444 240 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L24Q0WX57 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RRP1BQ14684 758 aaKnown RBP6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RABEP1Q15276 862 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 Q6ZUG5 572 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CYB5R4Q7L1T6 521 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RASEFQ8IZ41 740 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PNMA1Q8ND90 353 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SMCR8Q8TEV9 937 aaPredicted RBP6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CHURC1Q8WUH1 139 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CNKSR2Q8WXI2 1034 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MKL1Q969V6 931 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NBPF3Q9H094 633 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 VCPKMTQ9H867 229 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 AFG3L2Q9Y4W6 797 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CDK5RAP2Q96SN8 1893 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PLIN4Q96Q06 1357 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 A0A0G2JLL6 359 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KLF18A0A0U1RQI7 1052 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CPLX1O14810 134 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 WDR46O15213 610 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZBTB43O43298 467 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NMT2O60551 498 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 AOC2O75106 756 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZBED4O75132 1171 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FLOT1O75955 427 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PARP1P09874 1014 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GUCY1A2P33402 732 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RBM25P49756 843 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 AKAP17AQ02040 695 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TRAF1Q13077 416 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ARHGEF6Q15052 776 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SHROOM1Q2M3G4 852 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ADCK5Q3MIX3 580 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SH3D19Q5HYK7 790 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GPATCH4Q5T3I0 446 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 STOX1Q6ZVD7 989 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PRRT2Q7Z6L0 340 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ANKRD23Q86SG2 305 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FAM160B2Q86V87 743 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CLEC10AQ8IUN9 316 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MB21D2Q8IYB1 491 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SPICE1Q8N0Z3 855 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ENAHQ8N8S7 591 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GMCL1P1Q8NEA9 526 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ACER1Q8TDN7 264 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GTF3C2Q8WUA4 911 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DCAF4Q8WV16 495 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KCNB2Q92953 911 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BRF1Q92994 677 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PARK7Q99497 189 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TMEM47Q9BQJ4 181 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LRRC2Q9BYS8 371 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 UPF3BQ9BZI7 483 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RPAP3Q9H6T3 665 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZFYVE28Q9HCC9 887 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZSWIM6Q9HCJ5 1215 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GPCPD1Q9NPB8 672 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IL17RBQ9NRM6 502 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 HOXC10Q9NYD6 342 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FEM1BQ9UK73 627 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 AGTPBP1Q9UPW5 1226 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KCNH4Q9UQ05 1017 aa6.36□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IGKV6D-41A0A0C4DH26 115 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GOLGA8AA7E2F4 631 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GOLGA8BA8MQT2 603 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TMEM232C9JQI7 657 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PDHXO00330 501 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SH2B2O14492 632 aaPredicted RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CA12O43570 354 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DDAH1O94760 285 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NDUFB10O96000 172 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FDX1P10109 184 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CPA1P15085 419 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 VCAM1P19320 739 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LIFRP42702 1097 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TM4SF4P48230 202 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MCM2P49736 904 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms