RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZNF157P51786 506 aaPredicted RBP24.59■■□□□ 1.53
LSM6-207ENST00000515311 SPRYD7Q5W111 196 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 RASAL3Q86YV0 1011 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 LRRC47Q8N1G4 583 aaKnown RBP24.59■■□□□ 1.53
LSM6-207ENST00000515311 PNMA1Q8ND90 353 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 GMCL1P1Q8NEA9 526 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 BRF1Q92994 677 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 SENP2Q9HC62 589 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 GOPCQ9HD26 462 aa24.59■■□□□ 1.53
LSM6-207ENST00000515311 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.59■■□□□ 1.53
LSM6-207ENST00000515311 CCDC69A6NI79 296 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 IRF6O14896 467 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 ST18O60284 1047 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 GJA5P36382 358 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 USP14P54578 494 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 EVCP57679 992 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 MTMR2Q13614 643 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 NFXL1Q6ZNB6 911 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 CCDC102AQ96A19 550 aa24.58■■□□□ 1.53
LSM6-207ENST00000515311 RASSF10A6NK89 507 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 SLC10A3P09131 477 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 AK2P54819 239 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 SH3D19Q5HYK7 790 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 CATIPQ7Z7H3 387 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 LPAR1Q92633 364 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 VCPKMTQ9H867 229 aa24.57■■□□□ 1.52
LSM6-207ENST00000515311 USP17L2Q6R6M4 530 aa24.56■■□□□ 1.52
LSM6-207ENST00000515311 ZNF654Q8IZM8 581 aa24.56■■□□□ 1.52
LSM6-207ENST00000515311 C12orf42Q96LP6 360 aa24.56■■□□□ 1.52
LSM6-207ENST00000515311 SLC12A7Q9Y666 1083 aa24.56■■□□□ 1.52
LSM6-207ENST00000515311 A0A0G2JLL6 359 aaPredicted RBP24.55■■□□□ 1.52
LSM6-207ENST00000515311 F5H6K3 240 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 DDAH1O94760 285 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 RCAN1P53805 252 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 KLRC3Q07444 240 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 SNAPC2Q13487 334 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 APOA5Q6Q788 366 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 PRRT2Q7Z6L0 340 aaPredicted RBP24.55■■□□□ 1.52
LSM6-207ENST00000515311 GMCL1Q96IK5 515 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 BRPF3Q9ULD4 1205 aa24.55■■□□□ 1.52
LSM6-207ENST00000515311 KLF18A0A0U1RQI7 1052 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 NDUFB10O96000 172 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 CALM1P0DP23 149 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 CALM2P0DP24 149 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 CALM3P0DP25 149 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 GTF2A2P52657 109 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 C1QTNF8P60827 252 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 APOBRQ0VD83 1088 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 TROAPQ12815 778 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 SYNE3Q6ZMZ3 975 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 MAP3K14Q99558 947 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 EMILIN3Q9NT22 766 aa24.54■■□□□ 1.52
LSM6-207ENST00000515311 FAM155AB1AL88 458 aaPredicted RBP24.53■■□□□ 1.52
LSM6-207ENST00000515311 SNHG28P0DPA3 235 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 MCM2P49736 904 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 HMGCS2P54868 508 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 ZYXQ15942 572 aaKnown RBP24.53■■□□□ 1.52
LSM6-207ENST00000515311 DEFB115Q30KQ5 88 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 SLFN13Q68D06 897 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 PROCA1Q8NCQ7 364 aaPredicted RBP24.53■■□□□ 1.52
LSM6-207ENST00000515311 DCAF4Q8WV16 495 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 ZNF274Q96GC6 653 aaPredicted RBP24.53■■□□□ 1.52
LSM6-207ENST00000515311 TMOD4Q9NZQ9 345 aa24.53■■□□□ 1.52
LSM6-207ENST00000515311 ZBTB43O43298 467 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 PDHBP11177 359 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 CETPP11597 493 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 KIAA1755Q5JYT7 1200 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 MS4A4AQ96JQ5 239 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 NID2Q14112 1375 aa24.52■■□□□ 1.52
LSM6-207ENST00000515311 GOLGA8BA8MQT2 603 aa24.51■■□□□ 1.51
LSM6-207ENST00000515311 WDR46O15213 610 aaKnown RBP24.51■■□□□ 1.51
LSM6-207ENST00000515311 FASTKD5Q7L8L6 764 aaKnown RBP24.51■■□□□ 1.51
LSM6-207ENST00000515311 TPCN1Q9ULQ1 816 aa24.51■■□□□ 1.51
LSM6-207ENST00000515311 LIMCH1Q9UPQ0 1083 aa24.51■■□□□ 1.51
LSM6-207ENST00000515311 RAD21O60216 631 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 HSPA6P17066 643 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 VCAM1P19320 739 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 PDIA3P30101 505 aaKnown RBP24.5■■□□□ 1.51
LSM6-207ENST00000515311 MOGSQ13724 837 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 GRM4Q14833 912 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 MICU3Q86XE3 530 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 SPICE1Q8N0Z3 855 aa24.5■■□□□ 1.51
LSM6-207ENST00000515311 MANSC4A6NHS7 340 aaPredicted RBP24.49■■□□□ 1.51
LSM6-207ENST00000515311 SLC1A4P43007 532 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 MKRN3Q13064 507 aaKnown RBP24.49■■□□□ 1.51
LSM6-207ENST00000515311 PPP2R5BQ15173 497 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 ASPRV1Q53RT3 343 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 GPATCH4Q5T3I0 446 aaKnown RBP24.49■■□□□ 1.51
LSM6-207ENST00000515311 CYP4F22Q6NT55 531 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 PAXIP1Q6ZW49 1069 aaPredicted RBP24.49■■□□□ 1.51
LSM6-207ENST00000515311 MYL10Q9BUA6 226 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 HPS5Q9UPZ3 1129 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 PARP14Q460N5 1801 aa24.49■■□□□ 1.51
LSM6-207ENST00000515311 CCL15-CCL14A0A0B4J2E2 113 aa24.48■■□□□ 1.51
LSM6-207ENST00000515311 TESPA1A2RU30 521 aaPredicted RBP24.48■■□□□ 1.51
LSM6-207ENST00000515311 CD2BP2O95400 341 aaKnown RBP24.48■■□□□ 1.51
LSM6-207ENST00000515311 PARP1P09874 1014 aaKnown RBP24.48■■□□□ 1.51
LSM6-207ENST00000515311 BMP3P12645 472 aa24.48■■□□□ 1.51
LSM6-207ENST00000515311 KIF5BP33176 963 aa24.48■■□□□ 1.51
LSM6-207ENST00000515311 ZNF543Q08ER8 600 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms