RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 CLEC16AQ2KHT3 1053 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 ANGEL2Q5VTE6 544 aaKnown RBP8.53□□□□□ -1.04
CHD1-209ENST00000512844 Q8N3U1 123 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 TAB3Q8N5C8 712 aaPredicted RBP8.53□□□□□ -1.04
CHD1-209ENST00000512844 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 SLC6A18Q96N87 628 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 GPATCH2Q9NW75 528 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 PLAGL2Q9UPG8 496 aa8.53□□□□□ -1.04
CHD1-209ENST00000512844 UBOX5O94941 541 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 IKZF1Q13422 519 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 NKPD1Q17RQ9 610 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 BCL7CQ8WUZ0 217 aaPredicted RBP8.52□□□□□ -1.05
CHD1-209ENST00000512844 HSPA12BQ96MM6 686 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 TINF2Q9BSI4 451 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 U3KQE9 123 aa8.52□□□□□ -1.05
CHD1-209ENST00000512844 GIPRP48546 466 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 TNK2Q07912 1038 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 BBS9Q3SYG4 887 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 NAALADL2Q58DX5 795 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 THAP5Q7Z6K1 395 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 DTWD2Q8NBA8 298 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 SLC43A3Q8NBI5 491 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 SLC9A7Q96T83 725 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 ZSWIM5Q9P217 1185 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 R3HCC1Q9Y3T6 440 aaKnown RBP8.51□□□□□ -1.05
CHD1-209ENST00000512844 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
CHD1-209ENST00000512844 BNIP3Q12983 259 aa8.5□□□□□ -1.05
CHD1-209ENST00000512844 PLCL1Q15111 1095 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 RUFY4Q6ZNE9 571 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 C19orf47Q8N9M1 422 aaKnown RBP8.49□□□□□ -1.05
CHD1-209ENST00000512844 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
CHD1-209ENST00000512844 UBE2FQ969M7 185 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
CHD1-209ENST00000512844 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
CHD1-209ENST00000512844 SUCOQ9UBS9 1254 aaKnown RBP8.49□□□□□ -1.05
CHD1-209ENST00000512844 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
CHD1-209ENST00000512844 GP2P55259 537 aaKnown RBP8.48□□□□□ -1.05
CHD1-209ENST00000512844 NBPF12Q5TAG4 269 aaPredicted RBP8.48□□□□□ -1.05
CHD1-209ENST00000512844 UNC5AQ6ZN44 842 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 TTC6Q86TZ1 520 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 SHDQ96IW2 340 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 Q96M66 194 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 PHAXQ9H814 394 aaKnown RBP8.48□□□□□ -1.05
CHD1-209ENST00000512844 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
CHD1-209ENST00000512844 ST14Q9Y5Y6 855 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
CHD1-209ENST00000512844 LRRN2O75325 713 aa8.47□□□□□ -1.05
CHD1-209ENST00000512844 PMS1P54277 932 aaKnown RBP8.47□□□□□ -1.05
CHD1-209ENST00000512844 TMPRSS7Q7RTY8 843 aa8.47□□□□□ -1.05
CHD1-209ENST00000512844 TMEM192Q8IY95 271 aa8.47□□□□□ -1.05
CHD1-209ENST00000512844 C8orf37Q96NL8 207 aa8.47□□□□□ -1.05
CHD1-209ENST00000512844 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
CHD1-209ENST00000512844 ACRP10323 421 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 CD8BP10966 210 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 TPP2P29144 1249 aaPredicted RBP8.46□□□□□ -1.06
CHD1-209ENST00000512844 LTKP29376 864 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 ZP2Q05996 745 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 NMIQ13287 307 aaPredicted RBP8.46□□□□□ -1.06
CHD1-209ENST00000512844 ZNF574Q6ZN55 896 aaPredicted RBP8.46□□□□□ -1.06
CHD1-209ENST00000512844 PI4K2BQ8TCG2 481 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 GPR62Q9BZJ7 368 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 DUSP13Q9UII6 198 aa8.46□□□□□ -1.06
CHD1-209ENST00000512844 SSU72P8A0A1W2PR75 194 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 GNPTABQ3T906 1256 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 TDRD10Q5VZ19 366 aaKnown RBP8.45□□□□□ -1.06
CHD1-209ENST00000512844 CREG2Q8IUH2 290 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 TANGO6Q9C0B7 1094 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 PAK6Q9NQU5 681 aaPredicted RBP8.45□□□□□ -1.06
CHD1-209ENST00000512844 SEMA3GQ9NS98 782 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 FAM86C1Q9NVL1 165 aa8.45□□□□□ -1.06
CHD1-209ENST00000512844 TP53P04637 393 aaPredicted RBP8.44□□□□□ -1.06
CHD1-209ENST00000512844 FGRP09769 529 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 CD96P40200 585 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 SLC7A5Q01650 507 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 ZYXQ15942 572 aaKnown RBP8.44□□□□□ -1.06
CHD1-209ENST00000512844 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 SPRED2Q7Z698 418 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 ENOX1Q8TC92 643 aaKnown RBP8.44□□□□□ -1.06
CHD1-209ENST00000512844 DSCC1Q9BVC3 393 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 ACTR10Q9NZ32 417 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
CHD1-209ENST00000512844 A0A1W2PQH9 124 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 SMAD7O15105 426 aaKnown RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 STK10O94804 968 aaKnown RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 ATP2B1P20020 1258 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 CASP7P55210 303 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 AUHQ13825 339 aaKnown RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 NOL9Q5SY16 702 aaKnown RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 TSPYL5Q86VY4 417 aaPredicted RBP8.43□□□□□ -1.06
CHD1-209ENST00000512844 MCF2L2Q86YR7 1114 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 VWCEQ96DN2 955 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 CCDC120Q96HB5 630 aa8.43□□□□□ -1.06
CHD1-209ENST00000512844 GMLQ99445 158 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms