RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 KIF7Q2M1P5 1343 aa8.93□□□□□ -0.98
NR1I3-229ENST00000511748 IBTKQ9P2D0 1353 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-229ENST00000511748 RIC1Q4ADV7 1423 aa8.93□□□□□ -0.98
NR1I3-229ENST00000511748 A1BGP04217 495 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 PDE12Q6L8Q7 609 aaKnown RBP8.92□□□□□ -0.98
NR1I3-229ENST00000511748 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 HFE2Q6ZVN8 426 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 ZNF438Q7Z4V0 828 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 TRPM4Q8TD43 1214 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
NR1I3-229ENST00000511748 ADARB2Q9NS39 739 aaKnown RBP8.92□□□□□ -0.98
NR1I3-229ENST00000511748 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
NR1I3-229ENST00000511748 NPC1L1Q9UHC9 1359 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 ERVV-1B6SEH8 477 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 J3QW42 95 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-229ENST00000511748 PLAURQ03405 335 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 NOGQ13253 232 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 SAPCD2Q86UD0 394 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 NIM1KQ8IY84 436 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 SUPT20HQ8NEM7 779 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
NR1I3-229ENST00000511748 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
NR1I3-229ENST00000511748 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-229ENST00000511748 FOXD3Q9UJU5 478 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-229ENST00000511748 SNED1Q8TER0 1413 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 HTATSF1O43719 755 aaKnown RBP8.9□□□□□ -0.98
NR1I3-229ENST00000511748 ALBP02768 609 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 PCSK2P16519 638 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 NRLP54845 237 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 GPLD1P80108 840 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 CYP4F22Q6NT55 531 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
NR1I3-229ENST00000511748 NSUN5Q96P11 429 aaKnown RBP8.9□□□□□ -0.98
NR1I3-229ENST00000511748 CRAMP1Q96RY5 1269 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 MCOLN1Q9GZU1 580 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 STK17AQ9UEE5 414 aa8.9□□□□□ -0.98
NR1I3-229ENST00000511748 LTBP1Q14766 1721 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 CNTNAP5Q8WYK1 1306 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 GPR182O15218 404 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 TNFRSF21O75509 655 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 RPLP1P05386 114 aaKnown RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 CPB1P15086 417 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 AMPD1P23109 780 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 USP5P45974 858 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 CST9Q5W186 159 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 RBM17Q96I25 401 aaKnown RBP8.89□□□□□ -0.99
NR1I3-229ENST00000511748 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 GPRC5DQ9NZD1 345 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
NR1I3-229ENST00000511748 PATL2C9JE40 543 aaKnown RBP8.88□□□□□ -0.99
NR1I3-229ENST00000511748 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
NR1I3-229ENST00000511748 NDUFB5O43674 189 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 PSAPP07602 524 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 ALAS2P22557 587 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 SOX18P35713 384 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 EPS15P42566 896 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 DGKGP49619 791 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 TNIP1Q15025 636 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 FAM35AQ86V20 835 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 KANSL3Q9P2N6 904 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 NUDCQ9Y266 331 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
NR1I3-229ENST00000511748 PPIP5K2O43314 1243 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 CELF2O95319 508 aaKnown RBP8.87□□□□□ -0.99
NR1I3-229ENST00000511748 GRM1Q13255 1194 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 KIF6Q6ZMV9 814 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
NR1I3-229ENST00000511748 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 PNISRQ8TF01 805 aaKnown RBP8.87□□□□□ -0.99
NR1I3-229ENST00000511748 NUDT8Q8WV74 236 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 LPIN3Q9BQK8 851 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-229ENST00000511748 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
NR1I3-229ENST00000511748 COL3A1P02461 1466 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-229ENST00000511748 M0R082 166 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 EREGO14944 169 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 ACPPP15309 386 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 ORC1Q13415 861 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 PARP10Q53GL7 1025 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 TMC4Q7Z404 712 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 PPP1R42Q7Z4L9 355 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms