RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
COL6A6-203ENST00000511332 COL11A1P12107 1806 aaPredicted RBP15.17■□□□□ 0.02
COL6A6-203ENST00000511332 CASP8AP2Q9UKL3 1982 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 E7EWF7 191 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 SLC27A2O14975 620 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 OSBPP22059 807 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 HOXA7P31268 230 aaPredicted RBP15.16■□□□□ 0.02
COL6A6-203ENST00000511332 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
COL6A6-203ENST00000511332 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
COL6A6-203ENST00000511332 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 SIAH1Q8IUQ4 282 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 NCOA7Q8NI08 942 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 SMCR8Q8TEV9 937 aaPredicted RBP15.16■□□□□ 0.02
COL6A6-203ENST00000511332 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
COL6A6-203ENST00000511332 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
COL6A6-203ENST00000511332 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
COL6A6-203ENST00000511332 ZKSCAN1P17029 563 aaPredicted RBP15.15■□□□□ 0.02
COL6A6-203ENST00000511332 GMCL1P1Q8NEA9 526 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 MKL1Q969V6 931 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 IL17RBQ9NRM6 502 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 TSKSQ9UJT2 592 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
COL6A6-203ENST00000511332 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 RAD21O60216 631 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 NMT2O60551 498 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 TLR2O60603 784 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 NOVP48745 357 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
COL6A6-203ENST00000511332 GTF3C2Q8WUA4 911 aaPredicted RBP15.14■□□□□ 0.01
COL6A6-203ENST00000511332 TTC14Q96N46 770 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
COL6A6-203ENST00000511332 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
COL6A6-203ENST00000511332 RPAP3Q9H6T3 665 aaPredicted RBP15.14■□□□□ 0.01
COL6A6-203ENST00000511332 CYP2C8P10632 490 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 TOP1P11387 765 aaKnown RBP15.13■□□□□ 0.01
COL6A6-203ENST00000511332 MCCP23508 829 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
COL6A6-203ENST00000511332 KRT32Q14532 448 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 SART3Q15020 963 aaKnown RBP15.13■□□□□ 0.01
COL6A6-203ENST00000511332 STOX1Q6ZVD7 989 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 SPICE1Q8N0Z3 855 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
COL6A6-203ENST00000511332 ZSWIM5Q9P217 1185 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 TAF6LQ9Y6J9 622 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 TNKSO95271 1327 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 ZSWIM8A7E2V4 1837 aa15.13■□□□□ 0.01
COL6A6-203ENST00000511332 ERICH2A1L162 156 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 F5H6K3 240 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 GPR25O00155 361 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 NDUFB10O96000 172 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 HSPA4P34932 840 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 LBX1P52954 281 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 KLRC3Q07444 240 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 CATSPERGQ6ZRH7 1159 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 ZKSCAN3Q9BRR0 538 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
COL6A6-203ENST00000511332 MYH6P13533 1939 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 FKTNO75072 461 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 HERVK_113P62684 666 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 TSGA10IPQ3SY00 556 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 MB21D2Q8IYB1 491 aaPredicted RBP15.11■□□□□ 0.01
COL6A6-203ENST00000511332 ENAHQ8N8S7 591 aaPredicted RBP15.11■□□□□ 0.01
COL6A6-203ENST00000511332 GMCL1Q96IK5 515 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
COL6A6-203ENST00000511332 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 FLOT1O75955 427 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 MCM5P33992 734 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 SLC1A4P43007 532 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 FAM110CQ1W6H9 321 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 FAM83BQ5T0W9 1011 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 IFIT1BQ5T764 474 aaKnown RBP15.1■□□□□ 0.01
COL6A6-203ENST00000511332 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 LBX2Q6XYB7 198 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 CYB5R4Q7L1T6 521 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 NKX2-3Q8TAU0 364 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 ZNF296Q8WUU4 475 aaPredicted RBP15.1■□□□□ 0.01
COL6A6-203ENST00000511332 DCAF4Q8WV16 495 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 KCNB2Q92953 911 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 KAT14Q9H8E8 782 aa15.1■□□□□ 0.01
COL6A6-203ENST00000511332 CPA4Q9UI42 421 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms