RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PABPC4Q13310 644 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 TRIM61Q5EBN2 209 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 TDRD10Q5VZ19 366 aaKnown RBP7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ARMCX6Q7L4S7 300 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ZNF227Q86WZ6 799 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 WHAMMQ8TF30 809 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 STAG1Q8WVM7 1258 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ACSS3Q9H6R3 686 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 PIDD1Q9HB75 910 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 ENAMQ9NRM1 1142 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 DDX56Q9NY93 547 aaKnown RBP7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 PRR13Q9NZ81 148 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 WHRNQ9P202 907 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 CEP131Q9UPN4 1083 aa7.67□□□□□ -1.18
HMGB1P47-201ENST00000511281 F8W735 103 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 GNB5O14775 395 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 SHOXO15266 292 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 DRD2P14416 443 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 POU3F3P20264 500 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 RNF4P78317 190 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 ZNF385CQ66K41 422 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 FDX2Q6P4F2 183 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 DYMQ7RTS9 669 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 MRGPRX3Q96LB0 322 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 FBXL18Q96ME1 805 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 PSMG3-AS1Q96PY0 264 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 GBP3Q9H0R5 595 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 IRF2BPLQ9H1B7 796 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 INTS7Q9NVH2 962 aaKnown RBP7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 APEX2Q9UBZ4 518 aa7.66□□□□□ -1.18
HMGB1P47-201ENST00000511281 TRBV23-1A0A0A0MS06 115 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 TP53P04637 393 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 ITGAVP06756 1048 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 CD247P20963 164 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 L1CAMP32004 1257 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 PLEKHG6Q3KR16 790 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 FAM209AQ5JX71 171 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 DCAF15Q66K64 600 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 CCDC144CPQ8IYA2 1237 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 C7orf61Q8IZ16 206 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 C12orf50Q8NA57 414 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 BVESQ8NE79 360 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 KREMEN1Q96MU8 473 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 CAAP1Q9H8G2 361 aa7.65□□□□□ -1.18
HMGB1P47-201ENST00000511281 PPM1BO75688 479 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 GMPRP36959 345 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 SUMO1P63165 101 aaKnown RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 AUHQ13825 339 aaKnown RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 CBX2Q14781 532 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 YOD1Q5VVQ6 348 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 ARHGEF39Q8N4T4 335 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 CHAC2Q8WUX2 184 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 RNF141Q8WVD5 230 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 EZH1Q92800 747 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 CDC6Q99741 560 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 GP6Q9HCN6 339 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 KLHL42Q9P2K6 505 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 MAPRE3Q9UPY8 281 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 EMC9Q9Y3B6 208 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 ZNF451Q9Y4E5 1061 aa7.64□□□□□ -1.19
HMGB1P47-201ENST00000511281 GSG1L2A8MUP6 293 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 MARCH6O60337 910 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 RNGTTO60942 597 aaKnown RBP7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 POMZP3Q6PJE2 187 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 RNF180Q86T96 592 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 TRIM59Q8IWR1 403 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 CRACR2BQ8N4Y2 399 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 LRRN4CLQ8ND94 238 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 OSBP2Q969R2 916 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 RRAGCQ9HB90 399 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 ATP8A1Q9Y2Q0 1164 aa7.63□□□□□ -1.19
HMGB1P47-201ENST00000511281 PDGFRBP09619 1106 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 PABPC1P11940 636 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 MYCLP1P12525 358 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 SOX5P35711 763 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 PREPP48147 710 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 SNRPNP63162 240 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 MAP7Q14244 749 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 LETMD1Q6P1Q0 360 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 DHX37Q8IY37 1157 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 GSTCDQ8NEC7 633 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 NEDD1Q8NHV4 660 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 LENG1Q96BZ8 264 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 FGD4Q96M96 766 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 CEP41Q9BYV8 373 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 MKRN2Q9H000 416 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 NOP53Q9NZM5 478 aaKnown RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 LRP2BPQ9P2M1 347 aa7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 MAGEC2Q9UBF1 373 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P47-201ENST00000511281 MKL2Q9ULH7 1088 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms