RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GIMAP6Q6P9H5 292 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 TMTC2Q8N394 836 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 PRPF38AQ8NAV1 312 aaKnown RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC26Q8TAB7 109 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SEPT8Q92599 483 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ZKSCAN4Q969J2 545 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 PRMT6Q96LA8 375 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ABHD16BQ9H3Z7 469 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CNNM2Q9H8M5 875 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 COPRSQ9NQ92 184 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 XPNPEP3Q9NQH7 507 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SSX2IPQ9Y2D8 614 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 PALM3A6NDB9 673 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 FOXD2O60548 495 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF76P36508 570 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CAP2P40123 477 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 OAZ1P54368 228 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 HMGCS2P54868 508 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 FOXK2Q01167 660 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CWF19L2Q2TBE0 894 aaKnown RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 MIGA2Q7L4E1 593 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 AACSQ86V21 672 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ABI1Q8IZP0 508 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 FAM200AQ8TCP9 573 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 UIMC1Q96RL1 719 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SLC9A7Q96T83 725 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 NAP1L4Q99733 375 aaKnown RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ACAD9Q9H845 621 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 BRMS1Q9HCU9 246 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 EMSYQ7Z589 1322 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 KIF13BQ9NQT8 1826 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SEPT4O43236 478 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CYP2E1P05181 493 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CLTBP09497 229 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 MCAMP43121 646 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 OLFML2BQ68BL8 750 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 PDCD7Q8N8D1 485 aaKnown RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SPRYD3Q8NCJ5 442 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 BRI3BPQ8WY22 251 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC34Q96HJ3 373 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 PAWRQ96IZ0 340 aaKnown RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 GMLQ99445 158 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 SLF1Q9BQI6 1058 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 FSD1Q9BTV5 496 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 KIAA1683Q9H0B3 1180 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 EHD4Q9H223 541 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 AZI2Q9H6S1 392 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 MORF4L1Q9UBU8 362 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ZMYND8Q9ULU4 1186 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 IQSEC3Q9UPP2 1182 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 ELP1O95163 1332 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 DUOX1Q9NRD9 1551 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC196A0A1B0GTZ2 297 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 H0YGN5 161 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 SLC1A4P43007 532 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 RTP1P59025 263 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ERVK-9P63128 1117 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ERVK-24P63145 666 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 HNRNPUQ00839 825 aaKnown RBP eCLIP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 AKNAD1Q5T1N1 836 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 GPATCH4Q5T3I0 446 aaKnown RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 IQSEC1Q6DN90 963 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TATDN1Q6P1N9 297 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 HS6ST3Q8IZP7 471 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ESR2Q92731 530 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 FAM84BQ96KN1 310 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 LZTS2Q9BRK4 669 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 DAGLAQ9Y4D2 1042 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC171Q6TFL3 1326 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 A0A0G2JLL6 359 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 POTECB2RU33 542 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 NCAM2O15394 837 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 C6orf222P0C671 652 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TMOD1P28289 359 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 HOXA7P31268 230 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 DNM2P50570 870 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PPP4CP60510 307 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PPP2R5BQ15173 497 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 LRIT3Q3SXY7 679 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 GNASQ5JWF2 1037 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CCDC102BQ68D86 513 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 LHX8Q68G74 356 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ZC3H14Q6PJT7 736 aaKnown RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PRRT2Q7Z6L0 340 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 MIER1Q8N108 512 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 MAFAQ8NHW3 353 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CTCFLQ8NI51 663 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TGFBRAP1Q8WUH2 860 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ATXN2LQ8WWM7 1075 aaKnown RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 XAGE2Q96GT9 111 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 MTG1Q9BT17 334 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 KRT23Q9C075 422 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 LMAN2LQ9H0V9 348 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ASCC2Q9H1I8 757 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PHAXQ9H814 394 aaKnown RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 KAT14Q9H8E8 782 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 VTA1Q9NP79 307 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 RTEL1Q9NZ71 1219 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 UBR3Q6ZT12 1888 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms