RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RBPJLQ9UBG7 517 aa18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 MORF4L1Q9UBU8 362 aa18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 RLFQ13129 1914 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 RASA1P20936 1047 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 PRMT2P55345 433 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 HAND2P61296 217 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 BRCA2P51587 3418 aa18.45■□□□□ 0.54
SH3TC1-220ENST00000511002 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 HOXD10P28358 340 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 FLT3LGP49771 235 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 USP14P54578 494 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 ICA1Q05084 483 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 Q3C1V9 767 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 CCDC17Q96LX7 622 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 RPAP3Q9H6T3 665 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 TACC3Q9Y6A5 838 aa18.44■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L15C9J2P7 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L13C9JLJ4 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L11C9JVI0 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L18D6R9N7 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L22D6RA61 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L17D6RBQ6 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L19D6RCP7 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L20D6RJB6 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 PRDM1O75626 825 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 CNMDO75829 334 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 USP17L24Q0WX57 530 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 MTFR1Q15390 333 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
SH3TC1-220ENST00000511002 EEF2P13639 858 aaKnown RBP18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 GRK4P32298 578 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 PORCNQ9H237 461 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 INCENPQ9NQS7 918 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 PARP14Q460N5 1801 aa18.42■□□□□ 0.54
SH3TC1-220ENST00000511002 SPDYE16A6NNV3 312 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 ZNF213O14771 459 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 ELNP15502 786 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 EN2P19622 333 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 ERVK-9P63128 1117 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 ERVK-24P63145 666 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 ATP2B2Q01814 1243 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
SH3TC1-220ENST00000511002 SLC3A2P08195 630 aaKnown RBP18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 NBPF11Q86T75 865 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 GPRC5AQ8NFJ5 357 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 VCPKMTQ9H867 229 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 ARHGEF10LQ9HCE6 1279 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
SH3TC1-220ENST00000511002 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 ADCY3O60266 1144 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 CYP21A2P08686 494 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 PDE4BQ07343 736 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 COA7Q96BR5 231 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 KANSL2Q9H9L4 492 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 A0A0G2JMZ2 1700 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 NEDD4P46934 1319 aa18.39■□□□□ 0.53
SH3TC1-220ENST00000511002 IGKV6D-41A0A0C4DH26 115 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 IRF5Q13568 498 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 C8orf34Q49A92 452 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 STAG1Q8WVM7 1258 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 MKI67P46013 3256 aaKnown RBP18.38■□□□□ 0.53
SH3TC1-220ENST00000511002 ORC4O43929 436 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 REC8O95072 547 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 FGRP09769 529 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 FAM47AQ5JRC9 791 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 TOMM22Q9NS69 142 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 FBXO28Q9NVF7 368 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 BIN2Q9UBW5 565 aaPredicted RBP18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
SH3TC1-220ENST00000511002 SLC27A2O14975 620 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 INHAP05111 366 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 COL11A1P12107 1806 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 CCL5P13501 91 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms