RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 SPDYE3A6NKU9 549 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 TERTO14746 1132 aaKnown RBP11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 TIAF1O95411 115 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 ITGAVP06756 1048 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 AMPD1P23109 780 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 MFSD2AQ8NA29 543 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 PRPF38AQ8NAV1 312 aaKnown RBP11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 ISL2Q96A47 359 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 HOMER2Q9NSB8 354 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
SPOCK1-207ENST00000509978 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 CNGA1P29973 690 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 RAC1P63000 192 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 SUMO1P63165 101 aaKnown RBP11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 RNF180Q86T96 592 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 PPP1R13LQ8WUF5 828 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 IRF7Q92985 503 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 DPH2Q9BQC3 489 aaPredicted RBP11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 WHRNQ9P202 907 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 APEX2Q9UBZ4 518 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 AP4E1Q9UPM8 1137 aa11.11□□□□□ -0.63
SPOCK1-207ENST00000509978 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 PDE8AO60658 829 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 LRIG2O94898 1065 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 WISP1O95388 367 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 RAPGEF3O95398 923 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 PMLP29590 882 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 NBPF12Q5TAG4 269 aaPredicted RBP11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 YOD1Q5VVQ6 348 aaPredicted RBP11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 UBE3DQ7Z6J8 389 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 BVESQ8NE79 360 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 CHPF2Q9P2E5 772 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
SPOCK1-207ENST00000509978 COL17A1Q9UMD9 1497 aaPredicted RBP11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 A0A087WZG4 1122 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 PPM1BO75688 479 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 PABPC1P11940 636 aaKnown RBP11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 TRIM61Q5EBN2 209 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 IGF2-ASQ6U949 168 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 PCOLCE2Q9UKZ9 415 aa11.09□□□□□ -0.63
SPOCK1-207ENST00000509978 CELA2BP08218 269 aaPredicted RBP11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 CD247P20963 164 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 CDKN1CP49918 316 aaPredicted RBP11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 RNF4P78317 190 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 MAP7Q14244 749 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 NSMFQ6X4W1 530 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 OSBP2Q969R2 916 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 MRGPRX3Q96LB0 322 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 FGD4Q96M96 766 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 IER2Q9BTL4 223 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 FAM86C1Q9NVL1 165 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
SPOCK1-207ENST00000509978 ALG1L2C9J202 215 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 ASPAP45381 313 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 DYMQ7RTS9 669 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 SMYD4Q8IYR2 804 aaPredicted RBP11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 C2CD4AQ8NCU7 369 aaPredicted RBP11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 DNAJB8Q8NHS0 232 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 MCM8Q9UJA3 840 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
SPOCK1-207ENST00000509978 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 SHOXO15266 292 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 DRD2P14416 443 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 NFKB2Q00653 900 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 AUHQ13825 339 aaKnown RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 CT47A1Q5JQC4 288 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 POMZP3Q6PJE2 187 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 ARMCX6Q7L4S7 300 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 ADAT2Q7Z6V5 191 aaKnown RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 ARHGEF39Q8N4T4 335 aa11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 C12orf50Q8NA57 414 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 FAM126AQ9BYI3 521 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-207ENST00000509978 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms