RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
POLR2J3-214ENST00000508910 MKL1Q969V6 931 aa12.71□□□□□ -0.37
POLR2J3-214ENST00000508910 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
POLR2J3-214ENST00000508910 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.37
POLR2J3-214ENST00000508910 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 GRM4Q14833 912 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 PICK1Q9NRD5 415 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
POLR2J3-214ENST00000508910 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 CDC27P30260 824 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 PRKG1Q13976 671 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 TTLL12Q14166 644 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 SIAH1Q8IUQ4 282 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 NSUN7Q8NE18 718 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 FZD1Q9UP38 647 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 CSADQ9Y600 493 aa12.69□□□□□ -0.38
POLR2J3-214ENST00000508910 TRAF5O00463 557 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 PARP1P09874 1014 aaKnown RBP12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 PDHBP11177 359 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 IFNAR1P17181 557 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 PTPRAP18433 802 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 ADD1P35611 737 aaKnown RBP12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 GNAQP50148 359 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 VGLL4Q14135 290 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 SMARCC2Q8TAQ2 1214 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 FEZ1Q99689 392 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 KIF3AQ9Y496 699 aa12.68□□□□□ -0.38
POLR2J3-214ENST00000508910 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 JAK2O60674 1132 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 GJB2P29033 226 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 FKBP1BP68106 108 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 NTRK3Q16288 839 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 GPATCH4Q5T3I0 446 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 CCDC84Q86UT8 332 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 ZNF408Q9H9D4 720 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 MAD2L2Q9UI95 211 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 SNCAIPQ9Y6H5 919 aa12.67□□□□□ -0.38
POLR2J3-214ENST00000508910 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 F5H6K3 240 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 RAD21O60216 631 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 PLEKHA8P1O95397 391 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 NDUFB10O96000 172 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 DDIT3P35638 169 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 ECE1P42892 770 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 SLC1A4P43007 532 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 KLRC3Q07444 240 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-214ENST00000508910 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 KIF3CO14782 793 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 CELF2O95319 508 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 PDCP20941 246 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 USP14P54578 494 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
POLR2J3-214ENST00000508910 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms