RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
PROM1-207ENST00000508167 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
PROM1-207ENST00000508167 CAP2P40123 477 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
PROM1-207ENST00000508167 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 ELP3Q9H9T3 547 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
PROM1-207ENST00000508167 TRIM75PA6NK02 468 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 PIBF1Q8WXW3 757 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
PROM1-207ENST00000508167 TTLL1O95922 423 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 AKAP17AQ02040 695 aaKnown RBP12.79□□□□□ -0.36
PROM1-207ENST00000508167 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
PROM1-207ENST00000508167 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 ZBTB43O43298 467 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 JAK2O60674 1132 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
PROM1-207ENST00000508167 HUNKP57058 714 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 GABPAQ06546 454 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 ANKRD13AQ8IZ07 590 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 TOMM70O94826 608 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 SPP2Q13103 211 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
PROM1-207ENST00000508167 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
PROM1-207ENST00000508167 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
PROM1-207ENST00000508167 TBC1D12O60347 775 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
PROM1-207ENST00000508167 SHROOM1Q2M3G4 852 aaPredicted RBP12.78□□□□□ -0.36
PROM1-207ENST00000508167 PNMA1Q8ND90 353 aa12.78□□□□□ -0.36
PROM1-207ENST00000508167 PFKFB2O60825 505 aa12.77□□□□□ -0.36
PROM1-207ENST00000508167 TOP1P11387 765 aaKnown RBP12.77□□□□□ -0.36
PROM1-207ENST00000508167 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.36
PROM1-207ENST00000508167 ENAHQ8N8S7 591 aaPredicted RBP12.77□□□□□ -0.36
PROM1-207ENST00000508167 RESTQ13127 1097 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 KLRG1Q96E93 195 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 VAT1LQ9HCJ6 419 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 SLC1A4P43007 532 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
PROM1-207ENST00000508167 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
PROM1-207ENST00000508167 SH2B2O14492 632 aaPredicted RBP12.76□□□□□ -0.37
PROM1-207ENST00000508167 USP2O75604 605 aaPredicted RBP12.76□□□□□ -0.37
PROM1-207ENST00000508167 FDPSP14324 419 aaKnown RBP12.76□□□□□ -0.37
PROM1-207ENST00000508167 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 KIF5BP33176 963 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 DGKHQ86XP1 1220 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
PROM1-207ENST00000508167 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
PROM1-207ENST00000508167 VGLL4Q14135 290 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 RTN1Q16799 776 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 FAM184AQ8NB25 1140 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 GOPCQ9HD26 462 aa12.76□□□□□ -0.37
PROM1-207ENST00000508167 CCDC196A0A1B0GTZ2 297 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 NT5C2P49902 561 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 NID2Q14112 1375 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
PROM1-207ENST00000508167 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 GADL1Q6ZQY3 521 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 PSME4Q14997 1843 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 KIF3CO14782 793 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
PROM1-207ENST00000508167 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 FOSBP53539 338 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 SENP2Q9HC62 589 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
PROM1-207ENST00000508167 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 CALM1P0DP23 149 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 CALM2P0DP24 149 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 CALM3P0DP25 149 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
PROM1-207ENST00000508167 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 MYH1P12882 1939 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 ELP1O95163 1332 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
PROM1-207ENST00000508167 ECE1P42892 770 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 MTMR2Q13614 643 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms