RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 TRIB2Q92519 343 aa13.31□□□□□ -0.28
PTPN13-207ENST00000508063 LPAR1Q92633 364 aa13.31□□□□□ -0.28
PTPN13-207ENST00000508063 PORCNQ9H237 461 aa13.31□□□□□ -0.28
PTPN13-207ENST00000508063 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-207ENST00000508063 PLXNB2O15031 1838 aa13.31□□□□□ -0.28
PTPN13-207ENST00000508063 H0YGN5 161 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 ERC2O15083 957 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 PEX10O60683 326 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 CDK8P49336 464 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 MORN1Q5T089 497 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 APPBP2Q92624 585 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 APBA2Q99767 749 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
PTPN13-207ENST00000508063 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-207ENST00000508063 IVNS1ABPQ9Y6Y0 642 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
PTPN13-207ENST00000508063 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-207ENST00000508063 CNMDO75829 334 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 AKR1B1P15121 316 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 GNAT2P19087 354 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 EVX2Q03828 476 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 ICA1Q05084 483 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 MB21D1Q8N884 522 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 USP6NLQ92738 828 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
PTPN13-207ENST00000508063 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
PTPN13-207ENST00000508063 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
PTPN13-207ENST00000508063 EVI5O60447 810 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 PTPREP23469 700 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
PTPN13-207ENST00000508063 SBK1Q52WX2 424 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 POTEEQ6S8J3 1075 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 VCPKMTQ9H867 229 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
PTPN13-207ENST00000508063 CYP2D7A0A087X1C5 515 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 WDR46O15213 610 aaKnown RBP13.27□□□□□ -0.29
PTPN13-207ENST00000508063 STRNO43815 780 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 CHGBP05060 677 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 TRIM32Q13049 653 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 PAWRQ96IZ0 340 aaKnown RBP13.27□□□□□ -0.29
PTPN13-207ENST00000508063 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 OGDHLQ9ULD0 1010 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-207ENST00000508063 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
PTPN13-207ENST00000508063 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 FLOT1O75955 427 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 HOXC6P09630 235 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
PTPN13-207ENST00000508063 GRB14Q14449 540 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 OSBP2Q969R2 916 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 SLC5A4Q9NY91 659 aa13.26□□□□□ -0.29
PTPN13-207ENST00000508063 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 GPAA1O43292 621 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 APPP05067 770 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 EEF2P13639 858 aaKnown RBP13.25□□□□□ -0.29
PTPN13-207ENST00000508063 TDO2P48775 406 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 CCL14Q16627 93 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 SIAH1Q8IUQ4 282 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 MOV10L1Q9BXT6 1211 aaKnown RBP13.25□□□□□ -0.29
PTPN13-207ENST00000508063 MROH8Q9H579 483 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
PTPN13-207ENST00000508063 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 PATL2C9JE40 543 aaKnown RBP13.24□□□□□ -0.29
PTPN13-207ENST00000508063 MSCO60682 206 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 SLC25A27O95847 323 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 MX1P20591 662 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 AAMPQ13685 434 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 PLS1Q14651 629 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 ZNF444Q8N0Y2 327 aaPredicted RBP13.24□□□□□ -0.29
PTPN13-207ENST00000508063 ABRAQ8N0Z2 381 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 FSD1Q9BTV5 496 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
PTPN13-207ENST00000508063 ZNF236Q9UL36 1845 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms