RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PRDM11Q9NQV5 511 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 ABHD10Q9NUJ1 306 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 TAB2Q9NYJ8 693 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 TRIM10Q9UDY6 481 aa15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.02
SNCAIP-209ENST00000508017 MYH13Q9UKX3 1938 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 XDHP47989 1333 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 ERLIN1O75477 346 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 IL2RBP14784 551 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 CASP8Q14790 479 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 GSDMAQ96QA5 445 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
SNCAIP-209ENST00000508017 CTAGE15A4D2H0 777 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 MYO1CO00159 1063 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 N4BP3O15049 544 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 CTAGE8P0CG41 777 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 KRT2P35908 639 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 CT47A1Q5JQC4 288 aaPredicted RBP15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 FOXR1Q6PIV2 292 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 CTAGE6Q86UF2 777 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 CTAGE4Q8IX94 777 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 C10orf67Q8IYJ2 551 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 UBAC1Q9BSL1 405 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 TNKSO95271 1327 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 BAZ2BQ9UIF8 2168 aaKnown RBP15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 SEMA3EO15041 775 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 PHACTR2O75167 634 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 PLEKHA8P1O95397 391 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 TMTC1Q8IUR5 882 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 NACAP1Q9BZK3 213 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 TSPYL1Q9H0U9 437 aa15.19■□□□□ 0.02
SNCAIP-209ENST00000508017 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 AMPD2Q01433 879 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 PPARAQ07869 468 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 SEC23AQ15436 765 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 WHAMMP3Q1A5X7 153 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 RRAGBQ5VZM2 374 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 CHP1Q99653 195 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 LIMA1Q9UHB6 759 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 PDE8AO60658 829 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 FUT2Q10981 343 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 PIGBQ92521 554 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 MTRQ99707 1265 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 CWC15Q9P013 229 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 TFR2Q9UP52 801 aa15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 REXO2Q9Y3B8 237 aaKnown RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
SNCAIP-209ENST00000508017 NUP98P52948 1817 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 SLC5A1P13866 664 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 BCAMP50895 628 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 CYP26C1Q6V0L0 522 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 SRLQ86TD4 932 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 IQUBQ8NA54 791 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 MYO6Q9UM54 1294 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 MAPK8IP1Q9UQF2 711 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 COL5A2P05997 1499 aaPredicted RBP15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 LRP5O75197 1615 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 STARD3NLO95772 234 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 KRT9P35527 623 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 PTGDRQ13258 359 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 E2F4Q16254 413 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 RRP15Q9Y3B9 282 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
SNCAIP-209ENST00000508017 ENC1O14682 589 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 PIP4K2BP78356 416 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 NPY5RQ15761 445 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 TTC38Q5R3I4 469 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 LEKR1Q6ZMV7 388 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 RASSF4Q9H2L5 321 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 GUCA1BQ9UMX6 200 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 KCNJ18B7U540 433 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 ADAMTS3O15072 1205 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 GNAT2P19087 354 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 KCNJ12Q14500 433 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 MSL3Q8N5Y2 521 aaKnown RBP15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 NELFBQ8WX92 580 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms