RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 SLC4A10Q6U841 1118 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 KIF6Q6ZMV9 814 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 DNAJC10Q8IXB1 793 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 C4BP0C0L5 1744 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 CREB3O43889 395 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 GRM5P41594 1212 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
CLCN3-206ENST00000507875 PROSER3Q2NL68 480 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
CLCN3-206ENST00000507875 MAMSTRQ6ZN01 415 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 LATS2Q9NRM7 1088 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 UBTFL1P0CB47 393 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-206ENST00000507875 MTX1Q13505 466 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 CCDC191Q8NCU4 936 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 ZNF280CQ8ND82 737 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 APPBP2Q92624 585 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 MAP3K15Q6ZN16 1313 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 PPP1R12AO14974 1030 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-206ENST00000507875 MYL6BP14649 208 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 GRM2Q14416 872 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 RTN1Q16799 776 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-206ENST00000507875 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 MARVELD3Q96A59 401 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 SHDQ96IW2 340 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 USP44Q9H0E7 712 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 CD2APQ9Y5K6 639 aa8.53□□□□□ -1.04
CLCN3-206ENST00000507875 UBR3Q6ZT12 1888 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 SOX9P48436 509 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 CCDC96Q2M329 555 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 UBR7Q8N806 425 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 MTFR1LQ9H019 292 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 GRM8O00222 908 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 EREGO14944 169 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 A1BGP04217 495 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 EIF5P55010 431 aaKnown RBP8.52□□□□□ -1.05
CLCN3-206ENST00000507875 CCDC85BQ15834 202 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-206ENST00000507875 CEP85Q6P2H3 762 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 MEIS3Q99687 375 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 TNKS2Q9H2K2 1166 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 DCTPP1Q9H773 170 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-206ENST00000507875 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
CLCN3-206ENST00000507875 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 TCIRG1Q13488 830 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 GCKRQ14397 625 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ISCA1Q9BUE6 129 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CHST12Q9NRB3 414 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 C9orf78Q9NZ63 289 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-206ENST00000507875 TFCP2L1Q9NZI6 479 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ZBTB7AO95365 584 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ANXA1P04083 346 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 AIMP1Q12904 312 aaKnown RBP8.51□□□□□ -1.05
CLCN3-206ENST00000507875 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CLEC4GQ6UXB4 293 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ZNF830Q96NB3 372 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-206ENST00000507875 RPS6KC1Q96S38 1066 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CWC25Q9NXE8 425 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-206ENST00000507875 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
CLCN3-206ENST00000507875 CRKLP46109 303 aaKnown RBP8.5□□□□□ -1.05
CLCN3-206ENST00000507875 GET4Q7L5D6 327 aaPredicted RBP8.5□□□□□ -1.05
CLCN3-206ENST00000507875 FBXO27Q8NI29 283 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 SSH3Q8TE77 659 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 MYD88Q99836 296 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 LRRC4BQ9NT99 713 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 TMEM260Q9NX78 707 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 PRKAG3Q9UGI9 489 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 PRKAB1Q9Y478 270 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
CLCN3-206ENST00000507875 H7C1W4 665 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 HRO43593 1189 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 SH3BP5O60239 455 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 RPS6KA4O75676 772 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 IGKV5-2P06315 115 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 NR3C2P08235 984 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 BRDTQ58F21 947 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-206ENST00000507875 PPP1R26Q5T8A7 1209 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-206ENST00000507875 C1orf53Q5VUE5 145 aa8.49□□□□□ -1.05
CLCN3-206ENST00000507875 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms