RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 LMOD2Q6P5Q4 547 aa20.03■□□□□ 0.8
NUP54-205ENST00000507257 STAG1Q8WVM7 1258 aa20.03■□□□□ 0.8
NUP54-205ENST00000507257 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
NUP54-205ENST00000507257 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
NUP54-205ENST00000507257 CDHR2Q9BYE9 1310 aa20.03■□□□□ 0.8
NUP54-205ENST00000507257 GTF2A1P52655 376 aaPredicted RBP20.02■□□□□ 0.8
NUP54-205ENST00000507257 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.8
NUP54-205ENST00000507257 IFNL3Q8IZI9 196 aa20.02■□□□□ 0.8
NUP54-205ENST00000507257 AIDAQ96BJ3 306 aa20.02■□□□□ 0.8
NUP54-205ENST00000507257 GEMIN8Q9NWZ8 242 aaKnown RBP20.02■□□□□ 0.8
NUP54-205ENST00000507257 MYH13Q9UKX3 1938 aa20.02■□□□□ 0.8
NUP54-205ENST00000507257 ABL1P00519 1130 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 KRT9P35527 623 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 WTAPQ15007 396 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 METTL24Q5JXM2 366 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 NCAPH2Q6IBW4 605 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 VGLL2Q8N8G2 317 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.79
NUP54-205ENST00000507257 EPB41L4AQ9HCS5 686 aaPredicted RBP20.02■□□□□ 0.79
NUP54-205ENST00000507257 CABP5Q9NP86 173 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 REXO2Q9Y3B8 237 aaKnown RBP20.02■□□□□ 0.79
NUP54-205ENST00000507257 SAR1BQ9Y6B6 198 aa20.02■□□□□ 0.79
NUP54-205ENST00000507257 TNS2Q63HR2 1409 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 A0A1W2PQC6 194 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 TFRCP02786 760 aaKnown RBP20.01■□□□□ 0.79
NUP54-205ENST00000507257 XBP1P17861 261 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
NUP54-205ENST00000507257 TCP11X2Q5H9J9 407 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 SYMPKQ92797 1274 aaKnown RBP20.01■□□□□ 0.79
NUP54-205ENST00000507257 SLF1Q9BQI6 1058 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 NAPBQ9H115 298 aa20.01■□□□□ 0.79
NUP54-205ENST00000507257 A1BGP04217 495 aa20■□□□□ 0.79
NUP54-205ENST00000507257 AFMP43652 599 aa20■□□□□ 0.79
NUP54-205ENST00000507257 STIM1Q13586 685 aa20■□□□□ 0.79
NUP54-205ENST00000507257 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
NUP54-205ENST00000507257 TADA2BQ86TJ2 420 aa20■□□□□ 0.79
NUP54-205ENST00000507257 ZBTB38Q8NAP3 1195 aaPredicted RBP20■□□□□ 0.79
NUP54-205ENST00000507257 EPSTI1Q96J88 318 aa20■□□□□ 0.79
NUP54-205ENST00000507257 DNAJC7Q99615 494 aa20■□□□□ 0.79
NUP54-205ENST00000507257 CTNND2Q9UQB3 1225 aa20■□□□□ 0.79
NUP54-205ENST00000507257 BCORQ6W2J9 1755 aa20■□□□□ 0.79
NUP54-205ENST00000507257 ANO9A1A5B4 782 aa20■□□□□ 0.79
NUP54-205ENST00000507257 PHACTR2O75167 634 aa20■□□□□ 0.79
NUP54-205ENST00000507257 IDH1O75874 414 aaKnown RBP20■□□□□ 0.79
NUP54-205ENST00000507257 PAK1Q13153 545 aa20■□□□□ 0.79
NUP54-205ENST00000507257 OXER1Q8TDS5 423 aa20■□□□□ 0.79
NUP54-205ENST00000507257 SMARCC1Q92922 1105 aaPredicted RBP20■□□□□ 0.79
NUP54-205ENST00000507257 MYH3P11055 1940 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 MYH2Q9UKX2 1941 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 ERICH2A1L162 156 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 GTPBP6O43824 516 aaPredicted RBP19.99■□□□□ 0.79
NUP54-205ENST00000507257 GNAT2P19087 354 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 ATP2B1P20020 1258 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 SEMA3FQ13275 785 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 E2F4Q16254 413 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 FANCBQ8NB91 859 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 OR8K1Q8NGG5 319 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 RMND1Q9NWS8 449 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 TNS3Q68CZ2 1445 aa19.99■□□□□ 0.79
NUP54-205ENST00000507257 RNF225M0QZC1 329 aaPredicted RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 KRT2P35908 639 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 CCT6AP40227 531 aaKnown RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 KRT83P78385 493 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 AKAP17AQ02040 695 aaKnown RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 SWT1Q5T5J6 900 aaKnown RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 IQCEQ6IPM2 695 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 GBP6Q6ZN66 633 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 TTLL11Q8NHH1 800 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 PHF20Q9BVI0 1012 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 TACC3Q9Y6A5 838 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 A6NNZ2 444 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 KCNJ18B7U540 433 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 H7C1D1 291 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 ITIH3Q06033 890 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 KCNJ12Q14500 433 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 TUBB8Q3ZCM7 444 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 ZNF654Q8IZM8 581 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 RBM33Q96EV2 1170 aaKnown RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 CRACR2AQ9BSW2 395 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 RNF41Q9H4P4 317 aaPredicted RBP19.98■□□□□ 0.79
NUP54-205ENST00000507257 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
NUP54-205ENST00000507257 XDHP47989 1333 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 LRP5O75197 1615 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
NUP54-205ENST00000507257 MEA1Q16626 185 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 ZNF658Q5TYW1 1059 aaPredicted RBP19.97■□□□□ 0.79
NUP54-205ENST00000507257 CCNI2Q6ZMN8 369 aaPredicted RBP19.97■□□□□ 0.79
NUP54-205ENST00000507257 MMS22LQ6ZRQ5 1243 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 MMS19Q96T76 1030 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 CAPN11Q9UMQ6 739 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 PNPLA7Q6ZV29 1317 aa19.97■□□□□ 0.79
NUP54-205ENST00000507257 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 LDHAL6AQ6ZMR3 332 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 ZNF572Q7Z3I7 529 aaPredicted RBP19.96■□□□□ 0.79
NUP54-205ENST00000507257 SMYD4Q8IYR2 804 aaPredicted RBP19.96■□□□□ 0.79
NUP54-205ENST00000507257 FAM76AQ8TAV0 307 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 CHP1Q99653 195 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms