RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 KIF7Q2M1P5 1343 aa8.93□□□□□ -0.98
NR1I3-224ENST00000507215 IBTKQ9P2D0 1353 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-224ENST00000507215 RIC1Q4ADV7 1423 aa8.93□□□□□ -0.98
NR1I3-224ENST00000507215 A1BGP04217 495 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 PDE12Q6L8Q7 609 aaKnown RBP8.92□□□□□ -0.98
NR1I3-224ENST00000507215 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 HFE2Q6ZVN8 426 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 ZNF438Q7Z4V0 828 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 TRPM4Q8TD43 1214 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
NR1I3-224ENST00000507215 ADARB2Q9NS39 739 aaKnown RBP8.92□□□□□ -0.98
NR1I3-224ENST00000507215 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
NR1I3-224ENST00000507215 NPC1L1Q9UHC9 1359 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 ERVV-1B6SEH8 477 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 J3QW42 95 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-224ENST00000507215 PLAURQ03405 335 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 NOGQ13253 232 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 SAPCD2Q86UD0 394 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 NIM1KQ8IY84 436 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 SUPT20HQ8NEM7 779 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
NR1I3-224ENST00000507215 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
NR1I3-224ENST00000507215 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-224ENST00000507215 FOXD3Q9UJU5 478 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-224ENST00000507215 SNED1Q8TER0 1413 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 HTATSF1O43719 755 aaKnown RBP8.9□□□□□ -0.98
NR1I3-224ENST00000507215 ALBP02768 609 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 PCSK2P16519 638 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 NRLP54845 237 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 GPLD1P80108 840 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 CYP4F22Q6NT55 531 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
NR1I3-224ENST00000507215 NSUN5Q96P11 429 aaKnown RBP8.9□□□□□ -0.98
NR1I3-224ENST00000507215 CRAMP1Q96RY5 1269 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 MCOLN1Q9GZU1 580 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 STK17AQ9UEE5 414 aa8.9□□□□□ -0.98
NR1I3-224ENST00000507215 LTBP1Q14766 1721 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 CNTNAP5Q8WYK1 1306 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 GPR182O15218 404 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 TNFRSF21O75509 655 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 RPLP1P05386 114 aaKnown RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 CPB1P15086 417 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 AMPD1P23109 780 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 USP5P45974 858 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 CST9Q5W186 159 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 RBM17Q96I25 401 aaKnown RBP8.89□□□□□ -0.99
NR1I3-224ENST00000507215 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 GPRC5DQ9NZD1 345 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
NR1I3-224ENST00000507215 PATL2C9JE40 543 aaKnown RBP8.88□□□□□ -0.99
NR1I3-224ENST00000507215 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
NR1I3-224ENST00000507215 NDUFB5O43674 189 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 PSAPP07602 524 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 ALAS2P22557 587 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 SOX18P35713 384 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 EPS15P42566 896 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 DGKGP49619 791 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 TNIP1Q15025 636 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 FAM35AQ86V20 835 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 KANSL3Q9P2N6 904 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 NUDCQ9Y266 331 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
NR1I3-224ENST00000507215 PPIP5K2O43314 1243 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 CELF2O95319 508 aaKnown RBP8.87□□□□□ -0.99
NR1I3-224ENST00000507215 GRM1Q13255 1194 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 KIF6Q6ZMV9 814 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
NR1I3-224ENST00000507215 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 PNISRQ8TF01 805 aaKnown RBP8.87□□□□□ -0.99
NR1I3-224ENST00000507215 NUDT8Q8WV74 236 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 LPIN3Q9BQK8 851 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-224ENST00000507215 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
NR1I3-224ENST00000507215 COL3A1P02461 1466 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-224ENST00000507215 M0R082 166 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 EREGO14944 169 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 ACPPP15309 386 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 ORC1Q13415 861 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 PARP10Q53GL7 1025 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 TMC4Q7Z404 712 aa8.86□□□□□ -0.99
NR1I3-224ENST00000507215 PPP1R42Q7Z4L9 355 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms