RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 PDHXO00330 501 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
SFXN1-205ENST00000506963 VCAM1P19320 739 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
SFXN1-205ENST00000506963 KRT32Q14532 448 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 C8orf34Q49A92 452 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 RCSD1Q6JBY9 416 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 GADL1Q6ZQY3 521 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 RLFQ13129 1914 aa11.47□□□□□ -0.57
SFXN1-205ENST00000506963 WDR19Q8NEZ3 1342 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 F5H6K3 240 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 WDR46O15213 610 aaKnown RBP11.46□□□□□ -0.57
SFXN1-205ENST00000506963 NMT2O60551 498 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
SFXN1-205ENST00000506963 KLRC3Q07444 240 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 SEC23AQ15436 765 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 KIAA1755Q5JYT7 1200 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.57
SFXN1-205ENST00000506963 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 ZSCAN10Q96SZ4 725 aaPredicted RBP11.46□□□□□ -0.57
SFXN1-205ENST00000506963 PARK7Q99497 189 aaKnown RBP11.46□□□□□ -0.57
SFXN1-205ENST00000506963 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
SFXN1-205ENST00000506963 PARP14Q460N5 1801 aa11.46□□□□□ -0.58
SFXN1-205ENST00000506963 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 TLR2O60603 784 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 TRPA1O75762 1119 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 NDUFB10O96000 172 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 HSPA1AP0DMV8 641 aaKnown RBP11.45□□□□□ -0.58
SFXN1-205ENST00000506963 HSPA1BP0DMV9 641 aaKnown RBP11.45□□□□□ -0.58
SFXN1-205ENST00000506963 KCNA4P22459 653 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 ANTXR2P58335 489 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 CRHR2Q13324 411 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 DGKZQ13574 1117 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
SFXN1-205ENST00000506963 LBX2Q6XYB7 198 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 CATSPERGQ6ZRH7 1159 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 ENAHQ8N8S7 591 aaPredicted RBP11.45□□□□□ -0.58
SFXN1-205ENST00000506963 GMCL1Q96IK5 515 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
SFXN1-205ENST00000506963 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
SFXN1-205ENST00000506963 TNKSO95271 1327 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 HMGB1P09429 215 aaKnown RBP11.44□□□□□ -0.58
SFXN1-205ENST00000506963 SNHG28P0DPA3 235 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 OSBPP22059 807 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 MCM5P33992 734 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-205ENST00000506963 ANAPC15P60006 121 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 ATP2B2Q01814 1243 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
SFXN1-205ENST00000506963 C17orf99Q6UX52 265 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-205ENST00000506963 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 RPAP3Q9H6T3 665 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-205ENST00000506963 SNX14Q9Y5W7 946 aa11.44□□□□□ -0.58
SFXN1-205ENST00000506963 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 FOXN1O15353 648 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 PLA2G6O60733 806 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 TBC1D8O95759 1140 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 CYP2C8P10632 490 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 BCRP11274 1271 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 MCCP23508 829 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 EXOSC10Q01780 885 aaKnown RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 COG2Q14746 738 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 ADCK5Q3MIX3 580 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 SLFN13Q68D06 897 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 LRRC47Q8N1G4 583 aaKnown RBP11.43□□□□□ -0.58
SFXN1-205ENST00000506963 FBXL16Q8N461 479 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 IGDCC4Q8TDY8 1250 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 ZKSCAN3Q9BRR0 538 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 MORF4L1Q9UBU8 362 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 ADAMTS5Q9UNA0 930 aa11.43□□□□□ -0.58
SFXN1-205ENST00000506963 GPR25O00155 361 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms