RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 STK11IPQ8N1F8 1099 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 COLQQ9Y215 455 aaPredicted RBP17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 CEP290O15078 2479 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 PLXNB2O15031 1838 aa17.28■□□□□ 0.36
CDC42SE2-209ENST00000506419 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 GPAA1O43292 621 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 CAPN2P17655 700 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 RGS2P41220 211 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 CCNA1P78396 465 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 ICA1Q05084 483 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
CDC42SE2-209ENST00000506419 SALL3Q9BXA9 1300 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 SLC15A5A6NIM6 579 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 NPLOC4Q8TAT6 608 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 KANSL2Q9H9L4 492 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE2-209ENST00000506419 NAV1Q8NEY1 1877 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 IGHA2P01877 340 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 RASA1P20936 1047 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 WDR78Q5VTH9 848 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 LHX8Q68G74 356 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 LPAR1Q92633 364 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 ATG4CQ96DT6 458 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 OGDHLQ9ULD0 1010 aa17.25■□□□□ 0.35
CDC42SE2-209ENST00000506419 RANBP2P49792 3224 aaKnown RBP17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 ERC2O15083 957 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 HOXC6P09630 235 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 MX1P20591 662 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 GRB14Q14449 540 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 IFNL3Q8IZI9 196 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 APBA2Q99767 749 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 FBXO28Q9NVF7 368 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 ADAMTS5Q9UNA0 930 aa17.24■□□□□ 0.35
CDC42SE2-209ENST00000506419 FLOT1O75955 427 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 GNAT2P19087 354 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 ERCC3P19447 782 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 NECAB2Q7Z6G3 386 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
CDC42SE2-209ENST00000506419 IGKV6D-41A0A0C4DH26 115 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 WDR46O15213 610 aaKnown RBP17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 COBLO75128 1261 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 PRDM1O75626 825 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 APPP05067 770 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 ANKLE1Q8NAG6 615 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
CDC42SE2-209ENST00000506419 FOXP2O15409 715 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 CYP2C19P33261 490 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 TDO2P48775 406 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 NYAP2Q9P242 653 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 NR2E3Q9Y5X4 410 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 IVNS1ABPQ9Y6Y0 642 aa17.21■□□□□ 0.35
CDC42SE2-209ENST00000506419 STRNO43815 780 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 EVI5O60447 810 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 ADORA2AP29274 412 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 PLS1Q14651 629 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 LRRFIP1Q32MZ4 808 aaKnown RBP17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 MFSD14CQ5VZR4 134 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
CDC42SE2-209ENST00000506419 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms