RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 CAPN15O75808 1086 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 DDAH1O94760 285 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 CALM1P0DP23 149 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 CALM2P0DP24 149 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 CALM3P0DP25 149 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
RFC1-210ENST00000505077 APLP1P51693 650 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 JAG1P78504 1218 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 Q6ZUG5 572 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 LPAR1Q92633 364 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 SLC10A4Q96EP9 437 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 CLMNQ96JQ2 1002 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 MAP3K14Q99558 947 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 FEZ1Q99689 392 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 USP17L10C9JJH3 530 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 CXCL11O14625 94 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 BACE1P56817 501 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 PPP2R5BQ15173 497 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
RFC1-210ENST00000505077 SYNE3Q6ZMZ3 975 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 CATIPQ7Z7H3 387 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 CHMP4CQ96CF2 233 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 KCNH4Q9UQ05 1017 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 AFG3L2Q9Y4W6 797 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 SLC12A7Q9Y666 1083 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
RFC1-210ENST00000505077 CPA1P15085 419 aa12□□□□□ -0.49
RFC1-210ENST00000505077 AK2P54819 239 aa12□□□□□ -0.49
RFC1-210ENST00000505077 ATP2B2Q01814 1243 aa12□□□□□ -0.49
RFC1-210ENST00000505077 SNAPC2Q13487 334 aa12□□□□□ -0.49
RFC1-210ENST00000505077 COL9A3Q14050 684 aaPredicted RBP12□□□□□ -0.49
RFC1-210ENST00000505077 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
RFC1-210ENST00000505077 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
RFC1-210ENST00000505077 RGMBQ6NW40 437 aa12□□□□□ -0.49
RFC1-210ENST00000505077 APOA5Q6Q788 366 aa12□□□□□ -0.49
RFC1-210ENST00000505077 NFXL1Q6ZNB6 911 aa12□□□□□ -0.49
RFC1-210ENST00000505077 CLEC10AQ8IUN9 316 aa12□□□□□ -0.49
RFC1-210ENST00000505077 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
RFC1-210ENST00000505077 BRF1Q92994 677 aa12□□□□□ -0.49
RFC1-210ENST00000505077 CCDC102AQ96A19 550 aa12□□□□□ -0.49
RFC1-210ENST00000505077 OPTNQ96CV9 577 aa12□□□□□ -0.49
RFC1-210ENST00000505077 OTUD5Q96G74 571 aa12□□□□□ -0.49
RFC1-210ENST00000505077 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
RFC1-210ENST00000505077 GMCL1Q96IK5 515 aa12□□□□□ -0.49
RFC1-210ENST00000505077 WNK4Q96J92 1243 aa12□□□□□ -0.49
RFC1-210ENST00000505077 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
RFC1-210ENST00000505077 VCPKMTQ9H867 229 aa12□□□□□ -0.49
RFC1-210ENST00000505077 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
RFC1-210ENST00000505077 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
RFC1-210ENST00000505077 A0A0G2JLL6 359 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 RASSF10A6NK89 507 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 ZBTB43O43298 467 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 KIF5BP33176 963 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 TROAPQ12815 778 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SPP2Q13103 211 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 MTMR2Q13614 643 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SPRYD7Q5W111 196 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 USP17L2Q6R6M4 530 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 PRRT2Q7Z6L0 340 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SIAH1Q8IUQ4 282 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 DCAF4Q8WV16 495 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SNX21Q969T3 373 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 LRRC2Q9BYS8 371 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
RFC1-210ENST00000505077 TMOD4Q9NZQ9 345 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 LIMCH1Q9UPQ0 1083 aa11.99□□□□□ -0.49
RFC1-210ENST00000505077 MGAMO43451 1857 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 TRIM75PA6NK02 468 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 F5H6K3 240 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 IRF6O14896 467 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 SLC10A3P09131 477 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 ECE1P42892 770 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 ZNF157P51786 506 aaPredicted RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 GTF2A2P52657 109 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 KLRC3Q07444 240 aa11.98□□□□□ -0.49
RFC1-210ENST00000505077 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
RFC1-210ENST00000505077 FASTKD5Q7L8L6 764 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms