RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 LDLRAD1Q5T700 205 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 PCDHA11Q9Y5I1 949 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 MRPL58Q14197 206 aaKnown RBP8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 SNAP47Q5SQN1 464 aa8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 BHLHE22Q8NFJ8 381 aaPredicted RBP8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 KIF2CQ99661 725 aa8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 DUSP13Q9UII6 198 aa8.29□□□□□ -1.08
DEPDC1B-203ENST00000505017 SLC22A31A6NKX4 558 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 UBOX5O94941 541 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 EGR3Q06889 387 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 MPZL3Q6UWV2 235 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 ABHD4Q8TB40 342 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 CCDC74BQ96LY2 380 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 DIRC2Q96SL1 478 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 LRRC3Q9BY71 257 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 ZNF281Q9Y2X9 895 aa8.28□□□□□ -1.08
DEPDC1B-203ENST00000505017 RBM47A0AV96 593 aaKnown RBP8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 TSPAN15O95858 294 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 EFEMP2O95967 443 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 ERCC3P19447 782 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 PWP1Q13610 501 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 MYLIPQ8WY64 445 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 TRIT1Q9H3H1 467 aaKnown RBP8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 NSUN3Q9H649 340 aaKnown RBP8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 ADAMTS1Q9UHI8 967 aa8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
DEPDC1B-203ENST00000505017 C1QTNF9P0C862 333 aa8.26□□□□□ -1.09
DEPDC1B-203ENST00000505017 CFPP27918 469 aa8.26□□□□□ -1.09
DEPDC1B-203ENST00000505017 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
DEPDC1B-203ENST00000505017 KRTAP4-7Q9BYR0 210 aa8.26□□□□□ -1.09
DEPDC1B-203ENST00000505017 RNF32Q9H0A6 362 aa8.26□□□□□ -1.09
DEPDC1B-203ENST00000505017 RGS13O14921 159 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 ATE1O95260 518 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 EIF4A3P38919 411 aaKnown RBP8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 TEKQ02763 1124 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 PKN1Q16512 942 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 CCDC120Q96HB5 630 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 ASPNQ9BXN1 380 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 KCNH3Q9ULD8 1083 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 PCDHB14Q9Y5E9 798 aa8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 RSF1Q96T23 1441 aaPredicted RBP8.25□□□□□ -1.09
DEPDC1B-203ENST00000505017 NOTOA8MTQ0 251 aa8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 POLR2BP30876 1174 aaKnown RBP8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 TNNI2P48788 182 aa8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 ARSHQ5FYA8 562 aa8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 GIPC2Q8TF65 315 aa8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 ZNF296Q8WUU4 475 aaPredicted RBP8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 G6PC3Q9BUM1 346 aa8.24□□□□□ -1.09
DEPDC1B-203ENST00000505017 RAP1GAPP47736 663 aa8.23□□□□□ -1.09
DEPDC1B-203ENST00000505017 PHACTR4Q8IZ21 702 aa8.23□□□□□ -1.09
DEPDC1B-203ENST00000505017 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
DEPDC1B-203ENST00000505017 UBP1Q9NZI7 540 aa8.23□□□□□ -1.09
DEPDC1B-203ENST00000505017 CECR2Q9BXF3 1484 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 RAC2P15153 192 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 LTKP29376 864 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 SNW1Q13573 536 aaKnown RBP8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 LCNL1Q6ZST4 164 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 PDZD8Q8NEN9 1154 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 ANTXR1Q9H6X2 564 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 EHMT1Q9H9B1 1298 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
DEPDC1B-203ENST00000505017 CLCQ05315 142 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 CWF19L2Q2TBE0 894 aaKnown RBP8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 FBLN7Q53RD9 439 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 OVOS1Q6IE37 1185 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 USHBP1Q8N6Y0 703 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 HDAC8Q9BY41 377 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 GMIPQ9P107 970 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 SMARCA4P51532 1647 aa8.21□□□□□ -1.1
DEPDC1B-203ENST00000505017 MROH2BQ7Z745 1585 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 GALK1P51570 392 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 NR0B2Q15466 257 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 NBPF12Q5TAG4 269 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 CDCP2Q5VXM1 449 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 TMC3Q7Z5M5 1100 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 ATG4CQ96DT6 458 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 CNNM2Q9H8M5 875 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 CD320Q9NPF0 282 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 DCP1AQ9NPI6 582 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 GGT7Q9UJ14 662 aa8.2□□□□□ -1.1
DEPDC1B-203ENST00000505017 GBP1P32455 592 aa8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 NMIQ13287 307 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 NBPF9Q3BBW0 867 aa8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 EPB41L4BQ9H329 900 aa8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 MINPP1Q9UNW1 487 aa8.19□□□□□ -1.1
DEPDC1B-203ENST00000505017 TMEM82A0PJX8 343 aa8.18□□□□□ -1.1
DEPDC1B-203ENST00000505017 KRTAP9-7A8MTY7 169 aa8.18□□□□□ -1.1
DEPDC1B-203ENST00000505017 ETV2O00321 342 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms