RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 MUC3BQ9H195 1237 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 CRB1P82279 1406 aa8.09□□□□□ -1.11
SSBP2-204ENST00000504985 MEGF6O75095 1541 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 FAM83GA6ND36 823 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 PTCD1O75127 700 aaKnown RBP8.09□□□□□ -1.12
SSBP2-204ENST00000504985 ALX3O95076 343 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 ZNF853P0CG23 659 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 RRP1P56182 461 aaKnown RBP8.09□□□□□ -1.12
SSBP2-204ENST00000504985 MTHFSDQ2M296 383 aaKnown RBP8.09□□□□□ -1.12
SSBP2-204ENST00000504985 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.12
SSBP2-204ENST00000504985 ADAMTSL4Q6UY14 1074 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 RPAINQ86UA6 219 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 OTUD6BQ8N6M0 293 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 TSR2Q969E8 191 aaKnown RBP8.09□□□□□ -1.12
SSBP2-204ENST00000504985 DONSONQ9NYP3 566 aa8.09□□□□□ -1.12
SSBP2-204ENST00000504985 NRAPQ86VF7 1730 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 PARP4Q9UKK3 1724 aaKnown RBP8.08□□□□□ -1.12
SSBP2-204ENST00000504985 VIRMAQ69YN4 1812 aaKnown RBP8.08□□□□□ -1.12
SSBP2-204ENST00000504985 ZBTB39O15060 712 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 DCTN1Q14203 1278 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.08□□□□□ -1.12
SSBP2-204ENST00000504985 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 PIK3R5Q8WYR1 880 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 KRTAP4-12Q9BQ66 201 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 CHMP5Q9NZZ3 219 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 CCDC39Q9UFE4 941 aa8.08□□□□□ -1.12
SSBP2-204ENST00000504985 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 SHANK3Q9BYB0 1731 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 LRP6O75581 1613 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 LIG1P18858 919 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 ZAP70P43403 619 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 TDO2P48775 406 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 TRDNQ13061 729 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 MCM10Q7L590 875 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 PRDM11Q9NQV5 511 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
SSBP2-204ENST00000504985 WNK3Q9BYP7 1800 aa8.07□□□□□ -1.12
SSBP2-204ENST00000504985 KDM3BQ7LBC6 1761 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
SSBP2-204ENST00000504985 NRDCO43847 1150 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
SSBP2-204ENST00000504985 ICE2Q659A1 982 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 CCDC91Q7Z6B0 441 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 FAM210AQ96ND0 272 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 RASSF4Q9H2L5 321 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 MED4Q9NPJ6 270 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 DIAPH3Q9NSV4 1193 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 STIM2Q9P246 746 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 RAD50Q92878 1312 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 KIF16BQ96L93 1317 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 PLEKHG2Q9H7P9 1386 aa8.06□□□□□ -1.12
SSBP2-204ENST00000504985 PLIN1O60240 522 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 GUCY2CP25092 1073 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
SSBP2-204ENST00000504985 NOM1Q5C9Z4 860 aaKnown RBP8.05□□□□□ -1.12
SSBP2-204ENST00000504985 CENPQQ7L2Z9 268 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-204ENST00000504985 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-204ENST00000504985 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 ZKSCAN5Q9Y2L8 839 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 WDR17Q8IZU2 1322 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 CEMIPQ8WUJ3 1361 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 JCADQ9P266 1359 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
SSBP2-204ENST00000504985 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 HTATSF1O43719 755 aaKnown RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 BCAR3O75815 825 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 FSTP19883 344 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 RARSP54136 660 aaKnown RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 GNAI1P63096 354 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 ATP11AP98196 1134 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 HYAL2Q12891 473 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 CHAF1AQ13111 956 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 NAA30Q147X3 362 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 SYCP1Q15431 976 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 MEX3CQ5U5Q3 659 aaKnown RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 GBP4Q96PP9 640 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 GZF1Q9H116 711 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 DEF6Q9H4E7 631 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 PRDM16Q9HAZ2 1276 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 FEZ2Q9UHY8 353 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 NWD2Q9ULI1 1742 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 IBTKQ9P2D0 1353 aaPredicted RBP8.04□□□□□ -1.12
SSBP2-204ENST00000504985 SCN11AQ9UI33 1791 aa8.04□□□□□ -1.12
SSBP2-204ENST00000504985 MRC1P22897 1456 aa8.03□□□□□ -1.12
SSBP2-204ENST00000504985 KDM6AO15550 1401 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 CHL1O00533 1208 aa8.03□□□□□ -1.12
SSBP2-204ENST00000504985 PPP1R12AO14974 1030 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 HSP90AB1P08238 724 aaKnown RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 CT47B1P0C2W7 299 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 NEFHP12036 1026 aa8.03□□□□□ -1.12
SSBP2-204ENST00000504985 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
SSBP2-204ENST00000504985 ZNF772Q68DY9 489 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
SSBP2-204ENST00000504985 IL17REQ8NFR9 667 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms