RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TAOK1Q7L7X3 1001 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 GPBP1Q86WP2 473 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 CCDC110Q8TBZ0 833 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 TRIM31Q9BZY9 425 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ASIC3Q9UHC3 531 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 EBAG9O00559 213 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 KLHL30Q0D2K2 578 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 SRGAP1Q7Z6B7 1085 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 AFAP1L1Q8TED9 768 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 CBX8Q9HC52 389 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 TUBBP07437 444 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 SCNN1DP51172 638 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 PPP2R5CQ13362 524 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 BIRC2Q13490 618 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ARHGAP27Q6ZUM4 889 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 FLAD1Q8NFF5 587 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 STMN2Q93045 179 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 KIF24Q5T7B8 1368 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 CEP104O60308 925 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 BTDP43251 543 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF75DP51815 510 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ALAS1P13196 640 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 RPS8P62241 208 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 HS1BP3Q53T59 392 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 CASC4Q6P4E1 433 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 NCAPG2Q86XI2 1143 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 KLHL7Q8IXQ5 586 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 CCDC89Q8N998 374 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF496Q96IT1 587 aaPredicted RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 STIM2Q9P246 746 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 MRPL11Q9Y3B7 192 aaKnown RBP7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 TTLL3Q9Y4R7 772 aa7.95□□□□□ -1.14
SYNPO2-205ENST00000504178 PHKG2P15735 406 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 ATP5JP18859 108 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CLCN1P35523 988 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CYP2J2P51589 502 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 LRRC47Q8N1G4 583 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 SERTAD1Q9UHV2 236 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 STAM2O75886 525 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CNGA1P29973 690 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 KRT81Q14533 505 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 ZBTB8OSQ8IWT0 167 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 GSDMBQ8TAX9 411 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 IMPACTQ9P2X3 320 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 KCNG1Q9UIX4 513 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 K7ENM7 598 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 PPEF1O14829 653 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 GIPC1O14908 333 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 JAK2O60674 1132 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 NR1I2O75469 434 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 FLOT1O75955 427 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TNNC2P02585 160 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 GYG1P46976 350 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 LIG4P49917 911 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CERKLQ49MI3 558 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 PRR16Q569H4 304 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 DCAF15Q66K64 600 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 RDH13Q8NBN7 331 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TEKT3Q9BXF9 490 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 PSTPIP2Q9H939 334 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 ZMYM6O95789 1325 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 FAM170AA1A519 330 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 ATF7P17544 494 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 PABPC4Q13310 644 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CUL4BQ13620 913 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 GKAP1Q5VSY0 366 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TECP42680 631 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TYW1BQ6NUM6 668 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 DPY19L2Q6NUT2 758 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TMTC1Q8IUR5 882 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 MAIP1Q8WWC4 291 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 DDX25Q9UHL0 483 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
SYNPO2-205ENST00000504178 MED23Q9ULK4 1368 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA6CA6NDK9 693 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA6BA6NDN3 693 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA6DP0CG33 693 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 BCAMP50895 628 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 ATP11AP98196 1134 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 IFNL3Q8IZI9 196 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 ZBTB38Q8NAP3 1195 aaPredicted RBP7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RNF169Q8NCN4 708 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RBSNQ9H1K0 784 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA6AQ9NYA3 693 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 HHATQ5VTY9 493 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 MCTP2Q6DN12 878 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 CCDC105Q8IYK2 499 aa7.93□□□□□ -1.14
SYNPO2-205ENST00000504178 RPUSD2Q8IZ73 545 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms