RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
SCLT1-205ENST00000503401 LBX1P52954 281 aa19.45■□□□□ 0.7
SCLT1-205ENST00000503401 COL9A3Q14050 684 aaPredicted RBP19.45■□□□□ 0.7
SCLT1-205ENST00000503401 RASEFQ8IZ41 740 aa19.45■□□□□ 0.7
SCLT1-205ENST00000503401 ZFYVE28Q9HCC9 887 aa19.45■□□□□ 0.7
SCLT1-205ENST00000503401 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
SCLT1-205ENST00000503401 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
SCLT1-205ENST00000503401 MKL1Q969V6 931 aa19.44■□□□□ 0.7
SCLT1-205ENST00000503401 PARK7Q99497 189 aaKnown RBP19.44■□□□□ 0.7
SCLT1-205ENST00000503401 ASCC2Q9H1I8 757 aaPredicted RBP19.44■□□□□ 0.7
SCLT1-205ENST00000503401 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
SCLT1-205ENST00000503401 GOPCQ9HD26 462 aa19.44■□□□□ 0.7
SCLT1-205ENST00000503401 TCP11L1Q9NUJ3 509 aa19.44■□□□□ 0.7
SCLT1-205ENST00000503401 MTMR7Q9Y216 660 aa19.44■□□□□ 0.7
SCLT1-205ENST00000503401 CTCFP49711 727 aaPredicted RBP19.43■□□□□ 0.7
SCLT1-205ENST00000503401 RNF20Q5VTR2 975 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
SCLT1-205ENST00000503401 NCOA7Q8NI08 942 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 NUP88Q99567 741 aaPredicted RBP19.43■□□□□ 0.7
SCLT1-205ENST00000503401 SLC45A1Q9Y2W3 748 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 F5H6K3 240 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 NDUFB10O96000 172 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
SCLT1-205ENST00000503401 IRX3P78415 501 aaPredicted RBP19.43■□□□□ 0.7
SCLT1-205ENST00000503401 KLRC3Q07444 240 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 RCSD1Q6JBY9 416 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 RASGRP2Q7LDG7 609 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 IQCA1Q86XH1 822 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 LPAR1Q92633 364 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 CFHR5Q9BXR6 569 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 TANGO6Q9C0B7 1094 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
SCLT1-205ENST00000503401 TLR2O60603 784 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 SEC24BO95487 1268 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 OSBPP22059 807 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 HSPA4P34932 840 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 NOVP48745 357 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 PABPC4Q13310 644 aaKnown RBP eCLIP19.42■□□□□ 0.7
SCLT1-205ENST00000503401 MB21D2Q8IYB1 491 aaPredicted RBP19.42■□□□□ 0.7
SCLT1-205ENST00000503401 SMCR8Q8TEV9 937 aaPredicted RBP19.42■□□□□ 0.7
SCLT1-205ENST00000503401 ZSCAN10Q96SZ4 725 aaPredicted RBP19.42■□□□□ 0.7
SCLT1-205ENST00000503401 TMEM47Q9BQJ4 181 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 USP26Q9BXU7 913 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 PNMA3Q9UL41 463 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 TNKSO95271 1327 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 PARP14Q460N5 1801 aa19.42■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 GPR25O00155 361 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 PEX10O60683 326 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 FAM83BQ5T0W9 1011 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
SCLT1-205ENST00000503401 CATSPERGQ6ZRH7 1159 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 ENAHQ8N8S7 591 aaPredicted RBP19.41■□□□□ 0.7
SCLT1-205ENST00000503401 P2RX7Q99572 595 aaKnown RBP19.41■□□□□ 0.7
SCLT1-205ENST00000503401 UBAC1Q9BSL1 405 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 RLFQ13129 1914 aa19.41■□□□□ 0.7
SCLT1-205ENST00000503401 WDR46O15213 610 aaKnown RBP19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ECM2O94769 699 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ANTXR2P58335 489 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ADCK5Q3MIX3 580 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 PPP4R3BQ5MIZ7 849 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 SLFN13Q68D06 897 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 CENPFP49454 3210 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ZKSCAN1P17029 563 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-205ENST00000503401 NT5C2P49902 561 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 GMCL1P1Q8NEA9 526 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-205ENST00000503401 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
SCLT1-205ENST00000503401 ZSWIM8A7E2V4 1837 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 MCCP23508 829 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 HERVK_113P62684 666 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 C17orf99Q6UX52 265 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 ANKRD13CQ8N6S4 541 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 TTC14Q96N46 770 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 SENP2Q9HC62 589 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 FBXO28Q9NVF7 368 aa19.39■□□□□ 0.69
SCLT1-205ENST00000503401 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
SCLT1-205ENST00000503401 IFIT3O14879 490 aaKnown RBP19.38■□□□□ 0.69
SCLT1-205ENST00000503401 FLOT1O75955 427 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 SEC23AQ15436 765 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 POTEEQ6S8J3 1075 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 DGKHQ86XP1 1220 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 KCNB2Q92953 911 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 LRRC2Q9BYS8 371 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 GPHNQ9NQX3 736 aaPredicted RBP19.38■□□□□ 0.69
SCLT1-205ENST00000503401 SYNPO2Q9UMS6 1093 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 HTTP42858 3142 aa19.38■□□□□ 0.69
SCLT1-205ENST00000503401 PRC1O43663 620 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms