RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PUM3Q15397 648 aaKnown RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 SHROOM1Q2M3G4 852 aaPredicted RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 MFSD5Q6N075 450 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 C16orf59Q7L2K0 433 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 GJD3Q8N144 294 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 LENG1Q96BZ8 264 aaPredicted RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 IDI2Q9BXS1 227 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 RNF39Q9H2S5 420 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 COG5Q9UP83 839 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 ECM29Q5VYK3 1845 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 ARAP2Q8WZ64 1704 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 ST18O60284 1047 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 ALADP13716 330 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 HOXA7P31268 230 aaPredicted RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 CYP2C18P33260 490 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SLC4A3P48751 1232 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 RAB3GAP1Q15042 981 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SKOR2Q2VWA4 1001 aaPredicted RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SH3D19Q5HYK7 790 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 PSRC1Q6PGN9 363 aaPredicted RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 NCAPG2Q86XI2 1143 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SLF2Q8IX21 1173 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 ANKRD44Q8N8A2 993 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 NUP133Q8WUM0 1156 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 NAP1L5Q96NT1 182 aaPredicted RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 TBC1D2Q9BYX2 928 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 USP44Q9H0E7 712 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SIL1Q9H173 461 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 BICC1Q9H694 974 aaKnown RBP6.23□□□□□ -1.41
HTT-202ENST00000502820 SLC5A4Q9NY91 659 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 MTCH2Q9Y6C9 303 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 SLC4A7Q9Y6M7 1214 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 XIRP2A4UGR9 3374 aa6.23□□□□□ -1.41
HTT-202ENST00000502820 CACNA1FO60840 1977 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 MGAMO43451 1857 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 ATRNL1Q5VV63 1379 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L15C9J2P7 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 C19orf81C9J6K1 198 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L13C9JLJ4 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L11C9JVI0 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L18D6R9N7 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L22D6RA61 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L17D6RBQ6 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L19D6RCP7 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L20D6RJB6 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 GFRA3O60609 400 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 CA3P07451 260 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 ACLYP53396 1101 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L24Q0WX57 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 SNX17Q15036 470 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 USP17L2Q6R6M4 530 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 TEX11Q8IYF3 940 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 VGLL2Q8N8G2 317 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 GTF3C2Q8WUA4 911 aaPredicted RBP6.22□□□□□ -1.41
HTT-202ENST00000502820 LPIN2Q92539 896 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 TRIM44Q96DX7 344 aaPredicted RBP6.22□□□□□ -1.41
HTT-202ENST00000502820 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
HTT-202ENST00000502820 EMILIN3Q9NT22 766 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 SMC4Q9NTJ3 1288 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 FAM86C1Q9NVL1 165 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 BTBD7Q9P203 1132 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 SAP30BPQ9UHR5 308 aaKnown RBP6.22□□□□□ -1.41
HTT-202ENST00000502820 MTUS1Q9ULD2 1270 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 PHF24Q9UPV7 400 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 RABGAP1Q9Y3P9 1069 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 MYH3P11055 1940 aa6.22□□□□□ -1.41
HTT-202ENST00000502820 ESPNB1AK53 854 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 TLR3O15455 904 aaKnown RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 TBC1D12O60347 775 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 COBLO75128 1261 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 CNMDO75829 334 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 ASNSP08243 561 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 C6orf222P0C671 652 aaPredicted RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 ATP2A2P16615 1042 aaKnown RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 KCNA5P22460 613 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 PHKA1P46020 1223 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 RFX5P48382 616 aaPredicted RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 RARSP54136 660 aaKnown RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 JAG1P78504 1218 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 GRB14Q14449 540 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 KCNA10Q16322 511 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 NOL8Q76FK4 1167 aaKnown RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 MAPKAPK5Q8IW41 473 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 SMAP1Q8IYB5 467 aaPredicted RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 ANP32BQ92688 251 aaKnown RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 GLT1D1Q96MS3 346 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 WDR18Q9BV38 432 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 TANGO6Q9C0B7 1094 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 RAI14Q9P0K7 980 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 DENND2AQ9ULE3 1009 aa6.21□□□□□ -1.42
HTT-202ENST00000502820 CIZ1Q9ULV3 898 aaPredicted RBP6.21□□□□□ -1.42
HTT-202ENST00000502820 TCF20Q9UGU0 1960 aaKnown RBP6.2□□□□□ -1.42
HTT-202ENST00000502820 EPOPA6NHQ4 379 aa6.2□□□□□ -1.42
HTT-202ENST00000502820 RAD21O60216 631 aa6.2□□□□□ -1.42
HTT-202ENST00000502820 GH2P01242 217 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms