RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 C12orf42Q96LP6 360 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 CDHR5Q9HBB8 845 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 PA2G4Q9UQ80 394 aaKnown RBP6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 USP17L5A8MUK1 530 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 CYBAP13498 195 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 IL15P40933 162 aaPredicted RBP6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 BACE1P56817 501 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 ERVK-24P63145 666 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 MDM2Q00987 491 aaPredicted RBP6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 MTMR2Q13614 643 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 C9orf50Q5SZB4 431 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 GPR142Q7Z601 462 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 ADGRA1Q86SQ6 560 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 ZGPATQ8N5A5 531 aaKnown RBP6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 P2RX7Q99572 595 aaKnown RBP6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 PRDM6Q9NQX0 595 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 HMG20BQ9P0W2 317 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 HERC5Q9UII4 1024 aaKnown RBP6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 PIEZO1Q92508 2521 aa6.95□□□□□ -1.3
CSNK1E-214ENST00000498529 A0A1B0GUL7 405 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 ZKSCAN1P17029 563 aaPredicted RBP6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 CYP2B6P20813 491 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 MCAMP43121 646 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 PICALMQ13492 652 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 GRB14Q14449 540 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 DZIP1Q86YF9 867 aaKnown RBP6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 TRMT44Q8IYL2 757 aaKnown RBP6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 CDX2Q99626 313 aaPredicted RBP6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 SIL1Q9H173 461 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 PDLIM7Q9NR12 457 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 ZBTB21Q9ULJ3 1066 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 SCN5AQ14524 2016 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 FLT1P17948 1338 aa6.94□□□□□ -1.3
CSNK1E-214ENST00000498529 TMEM265A0A087WTH1 108 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 DNM1LO00429 736 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 MAP3K7O43318 606 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 ASNSP08243 561 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 ITGB8P26012 769 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 MAPK4P31152 587 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 RGS2P41220 211 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 SMAD3P84022 425 aaKnown RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 PABPC4Q13310 644 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 SHHQ15465 462 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 ALDH1L2Q3SY69 923 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 ZSCAN29Q8IWY8 852 aaPredicted RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 MAFAQ8NHW3 353 aaPredicted RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 NPLOC4Q8TAT6 608 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 SH3RF3Q8TEJ3 882 aaPredicted RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 LPAR1Q92633 364 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 MEIS3Q99687 375 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 CEP126Q9P2H0 1117 aa6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 DDX20Q9UHI6 824 aaKnown RBP6.93□□□□□ -1.3
CSNK1E-214ENST00000498529 PRRC2BQ5JSZ5 2229 aaKnown RBP6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 GUCY1A2P33402 732 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 EPHB4P54760 987 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 RTP1P59025 263 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 PPP4CP60510 307 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TIMM10P62072 90 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TSR1Q2NL82 804 aaKnown RBP6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 ZNF697Q5TEC3 545 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TATDN1Q6P1N9 297 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TBC1D9Q6ZT07 1266 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 PLEKHH3Q7Z736 793 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 GPRC5AQ8NFJ5 357 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 GTF3C2Q8WUA4 911 aaPredicted RBP6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 MYLIPQ8WY64 445 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 ZDHHC16Q969W1 377 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 BTBD7Q9P203 1132 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 ABCF2Q9UG63 623 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 SALL2Q9Y467 1007 aaPredicted RBP6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 MUC6Q6W4X9 2439 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TET1Q8NFU7 2136 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 ZNF318Q5VUA4 2279 aa6.92□□□□□ -1.3
CSNK1E-214ENST00000498529 TRIM43BA6NCK2 446 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SLC15A5A6NIM6 579 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 VCAM1P19320 739 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 PTPREP23469 700 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 IRX3P78415 501 aaPredicted RBP6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SLFN5Q08AF3 891 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 TFCP2Q12800 502 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SPTY2D1Q68D10 685 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms