RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 C19orf47Q8N9M1 422 aaKnown RBP7.66□□□□□ -1.18
SSR3-209ENST00000498205 DTWD2Q8NBA8 298 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 SLC43A3Q8NBI5 491 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 ENOX1Q8TC92 643 aaKnown RBP7.66□□□□□ -1.18
SSR3-209ENST00000498205 CPLX3Q8WVH0 158 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 PPT2Q9UMR5 302 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 U3KQE9 123 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 GIPRP48546 466 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 NASPP49321 788 aaPredicted RBP7.65□□□□□ -1.18
SSR3-209ENST00000498205 CDKAL1Q5VV42 579 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 LSRQ86X29 649 aaPredicted RBP7.65□□□□□ -1.18
SSR3-209ENST00000498205 VWCEQ96DN2 955 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 CCDC120Q96HB5 630 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 Q96M66 194 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 HSPA12BQ96MM6 686 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.18
SSR3-209ENST00000498205 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
SSR3-209ENST00000498205 COL17A1Q9UMD9 1497 aaPredicted RBP7.65□□□□□ -1.18
SSR3-209ENST00000498205 CNTNAP4Q9C0A0 1308 aa7.64□□□□□ -1.19
SSR3-209ENST00000498205 FUT4P22083 530 aa7.64□□□□□ -1.19
SSR3-209ENST00000498205 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
SSR3-209ENST00000498205 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
SSR3-209ENST00000498205 ANTXR1Q9H6X2 564 aa7.64□□□□□ -1.19
SSR3-209ENST00000498205 PRR13Q9NZ81 148 aa7.64□□□□□ -1.19
SSR3-209ENST00000498205 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 H3BS24 57 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 CD8BP10966 210 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 SRFP11831 508 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 IKZF1Q13422 519 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 SLC23A3Q6PIS1 610 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 SLC6A18Q96N87 628 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 SLC9A7Q96T83 725 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 KRTAP4-6Q9BYQ5 205 aa7.63□□□□□ -1.19
SSR3-209ENST00000498205 ADAMTS4O75173 837 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 ARID5AQ03989 594 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 BNIP3Q12983 259 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 PLCL1Q15111 1095 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 SPRED2Q7Z698 418 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 UBE2FQ969M7 185 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 SHDQ96IW2 340 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 TINF2Q9BSI4 451 aa7.62□□□□□ -1.19
SSR3-209ENST00000498205 SUCOQ9UBS9 1254 aaKnown RBP7.62□□□□□ -1.19
SSR3-209ENST00000498205 SSBP05455 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
SSR3-209ENST00000498205 POLR2BP30876 1174 aaKnown RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 IRAK1P51617 712 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 PMS1P54277 932 aaKnown RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 ZP2Q05996 745 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 CLEC16AQ2KHT3 1053 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 TNNI3KQ59H18 835 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 CCDC81Q6ZN84 652 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 TSPYL5Q86VY4 417 aaPredicted RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 PI4K2BQ8TCG2 481 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 SYTL4Q96C24 671 aaPredicted RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 GMLQ99445 158 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 MKRN2Q9H000 416 aaKnown RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 DUSP15Q9H1R2 295 aaPredicted RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 ZSWIM5Q9P217 1185 aa7.61□□□□□ -1.19
SSR3-209ENST00000498205 OAS3Q9Y6K5 1087 aaKnown RBP7.61□□□□□ -1.19
SSR3-209ENST00000498205 ACRP10323 421 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 TPP2P29144 1249 aaPredicted RBP7.6□□□□□ -1.19
SSR3-209ENST00000498205 CASP7P55210 303 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 NBPF9Q3BBW0 867 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 ZNF574Q6ZN55 896 aaPredicted RBP7.6□□□□□ -1.19
SSR3-209ENST00000498205 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.6□□□□□ -1.191e-13■□□□□ 8.2
SSR3-209ENST00000498205 PCDHB12Q9Y5F1 795 aa7.6□□□□□ -1.19
SSR3-209ENST00000498205 BIN1O00499 593 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
SSR3-209ENST00000498205 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 ABI1Q8IZP0 508 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 DAGLBQ8NCG7 672 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
SSR3-209ENST00000498205 C8orf37Q96NL8 207 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 ATP13A1Q9HD20 1204 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
SSR3-209ENST00000498205 ZCCHC6Q5VYS8 1495 aaKnown RBP7.58□□□□□ -1.2
SSR3-209ENST00000498205 ENDOUP21128 410 aaKnown RBP7.58□□□□□ -1.2
SSR3-209ENST00000498205 GAB4Q2WGN9 574 aa7.58□□□□□ -1.2
SSR3-209ENST00000498205 XP32Q5T750 250 aa7.58□□□□□ -1.2
SSR3-209ENST00000498205 TTC6Q86TZ1 520 aa7.58□□□□□ -1.2
SSR3-209ENST00000498205 ZNF655Q8N720 491 aaPredicted RBP7.58□□□□□ -1.2
SSR3-209ENST00000498205 ZNF214Q9UL59 606 aaPredicted RBP7.58□□□□□ -1.2
SSR3-209ENST00000498205 SIGLEC6O43699 453 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 AUHQ13825 339 aaKnown RBP7.57□□□□□ -1.2
SSR3-209ENST00000498205 ZNF792Q3KQV3 632 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 CBLL1Q75N03 491 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 CCDC144CPQ8IYA2 1237 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 C7orf61Q8IZ16 206 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 ADGRE2Q9UHX3 823 aa7.57□□□□□ -1.2
SSR3-209ENST00000498205 LRRN2O75325 713 aa7.56□□□□□ -1.2
SSR3-209ENST00000498205 FGRP09769 529 aa7.56□□□□□ -1.2
SSR3-209ENST00000498205 LTKP29376 864 aa7.56□□□□□ -1.2
SSR3-209ENST00000498205 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
SSR3-209ENST00000498205 HDAC8Q9BY41 377 aa7.56□□□□□ -1.2
SSR3-209ENST00000498205 CARS2Q9HA77 564 aaKnown RBP7.56□□□□□ -1.2
SSR3-209ENST00000498205 FBXL21Q9UKT6 434 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms