RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 TNKSO95271 1327 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 IFIT3O14879 490 aaKnown RBP23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 PRC1O43663 620 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 NOVP48745 357 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 ANKRD23Q86SG2 305 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 DGKHQ86XP1 1220 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 SPICE1Q8N0Z3 855 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 C12orf42Q96LP6 360 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 JAKMIP1Q96N16 626 aaKnown RBP23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 TMEM47Q9BQJ4 181 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 AGTPBP1Q9UPW5 1226 aa23.1■■□□□ 1.29
HLA-DPB1-217ENST00000498038 ERICH2A1L162 156 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 F5H6K3 240 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 PDHXO00330 501 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 TOP1P11387 765 aaKnown RBP23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 ANTXR2P58335 489 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 KLRC3Q07444 240 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 COL9A3Q14050 684 aaPredicted RBP23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 SART3Q15020 963 aaKnown RBP23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 KIAA1755Q5JYT7 1200 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 RCSD1Q6JBY9 416 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 ENAHQ8N8S7 591 aaPredicted RBP23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 JMYQ8N9B5 988 aa23.09■■□□□ 1.29
HLA-DPB1-217ENST00000498038 HMGB1P09429 215 aaKnown RBP23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 PSMA5P28066 241 aa23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 LPAR1Q92633 364 aa23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 BEGAINQ9BUH8 593 aa23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 RNF186Q9NXI6 227 aa23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 SYNPO2Q9UMS6 1093 aa23.08■■□□□ 1.29
HLA-DPB1-217ENST00000498038 TRPA1O75762 1119 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ALDH1A1P00352 501 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 VCAM1P19320 739 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 PABPC4Q13310 644 aaKnown RBP eCLIP23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TMEM67Q5HYA8 995 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 IFIT1BQ5T764 474 aaKnown RBP23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 DHX32Q7L7V1 743 aaKnown RBP23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ANKS1AQ92625 1134 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 RPAP3Q9H6T3 665 aaPredicted RBP23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 KAT14Q9H8E8 782 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 MTMR7Q9Y216 660 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 PTPRFP10586 1907 aa23.07■■□□□ 1.28
HLA-DPB1-217ENST00000498038 NDUFB10O96000 172 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CPA1P15085 419 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 WTAPQ15007 396 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SEC23AQ15436 765 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SLFN13Q68D06 897 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 BLOC1S2Q6QNY1 142 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 GMCL1P1Q8NEA9 526 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 IGDCC4Q8TDY8 1250 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 UPF2Q9HAU5 1272 aaKnown RBP23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ZCCHC17Q9NP64 241 aaKnown RBP23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
HLA-DPB1-217ENST00000498038 LOC285556D6RIA3 1793 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L15C9J2P7 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L13C9JLJ4 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L11C9JVI0 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L18D6R9N7 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L22D6RA61 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L17D6RBQ6 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L19D6RCP7 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L20D6RJB6 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CASTP20810 708 aaKnown RBP23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 OSBPP22059 807 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ANAPC15P60006 121 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 EXOSC10Q01780 885 aaKnown RBP23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 USP17L24Q0WX57 530 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TAF1CQ15572 869 aaPredicted RBP23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TMEM87BQ96K49 555 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 LRRC2Q9BYS8 371 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 MYH4Q9Y623 1939 aa23.05■■□□□ 1.28
HLA-DPB1-217ENST00000498038 WDR46O15213 610 aaKnown RBP23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 HOXA7P31268 230 aaPredicted RBP23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 FAM83BQ5T0W9 1011 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CATSPERGQ6ZRH7 1159 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 PNMA1Q8ND90 353 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TCEANC2Q96MN5 208 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 NUP88Q99567 741 aaPredicted RBP23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 C22orf23Q9BZE7 217 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TANGO6Q9C0B7 1094 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 GPHNQ9NQX3 736 aaPredicted RBP23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 PNMA3Q9UL41 463 aa23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ISY1Q9ULR0 285 aaKnown RBP23.04■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CYP2C8P10632 490 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 IRX3P78415 501 aaPredicted RBP23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 TM6SF1Q9BZW5 370 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ASCC2Q9H1I8 757 aaPredicted RBP23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SENP2Q9HC62 589 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ZFYVE28Q9HCC9 887 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 ZSWIM6Q9HCJ5 1215 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 WDR19Q8NEZ3 1342 aa23.03■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SH2B2O14492 632 aaPredicted RBP23.02■■□□□ 1.28
HLA-DPB1-217ENST00000498038 CA12O43570 354 aa23.02■■□□□ 1.28
HLA-DPB1-217ENST00000498038 RPS6KB1P23443 525 aa23.02■■□□□ 1.28
HLA-DPB1-217ENST00000498038 SLC1A4P43007 532 aa23.02■■□□□ 1.28
HLA-DPB1-217ENST00000498038 FGD1P98174 961 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms