RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 TTC14Q96N46 770 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 TANGO6Q9C0B7 1094 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
PTPRN-218ENST00000497977 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 SLC5A4Q9NY91 659 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
PTPRN-218ENST00000497977 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
PTPRN-218ENST00000497977 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 STRNO43815 780 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 VCAM1P19320 739 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 RASA1P20936 1047 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 GUCY1A2P33402 732 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 COPB2P35606 906 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 LBX2Q6XYB7 198 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 ESR2Q92731 530 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 CNNM2Q9H8M5 875 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-218ENST00000497977 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 ZMYM6O95789 1325 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 RAD50Q92878 1312 aa12.29□□□□□ -0.44
PTPRN-218ENST00000497977 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 F5H6K3 240 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
PTPRN-218ENST00000497977 KLRC3Q07444 240 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 CCDC129Q6ZRS4 1044 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
PTPRN-218ENST00000497977 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 NKX2-3Q8TAU0 364 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 CHURC1Q8WUH1 139 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 SOCS4Q8WXH5 440 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 NUDT12Q9BQG2 462 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 KRT23Q9C075 422 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 EPB41L4AQ9HCS5 686 aaPredicted RBP12.28□□□□□ -0.44
PTPRN-218ENST00000497977 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
PTPRN-218ENST00000497977 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
PTPRN-218ENST00000497977 A0A1W2PRG0 241 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 ORC4O43929 436 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 ZBED4O75132 1171 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 PRDM1O75626 825 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 FLOT1O75955 427 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 SLC25A27O95847 323 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 GRK4P32298 578 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 ERVK-24P63145 666 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 IRF5Q13568 498 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 RCSD1Q6JBY9 416 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 RBPJLQ9UBG7 517 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 ROBO3Q96MS0 1386 aa12.27□□□□□ -0.45
PTPRN-218ENST00000497977 FOCADQ5VW36 1801 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
PTPRN-218ENST00000497977 FGRP09769 529 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 DSG3P32926 999 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
PTPRN-218ENST00000497977 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 SIAH1Q8IUQ4 282 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 MROH8Q9H579 483 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
PTPRN-218ENST00000497977 LAMB1P07942 1786 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
PTPRN-218ENST00000497977 CHMLP26374 656 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 FLT3LGP49771 235 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 IKQ13123 557 aaPredicted RBP12.25□□□□□ -0.45
PTPRN-218ENST00000497977 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 WDR78Q5VTH9 848 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 FAM160B2Q86V87 743 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 DGKHQ86XP1 1220 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 SHCBP1Q8NEM2 672 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 STAG1Q8WVM7 1258 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
PTPRN-218ENST00000497977 ADGRA2Q96PE1 1338 aa12.25□□□□□ -0.45
PTPRN-218ENST00000497977 ERICH2A1L162 156 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 ADCY3O60266 1144 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 BMP3P12645 472 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 RGS2P41220 211 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 SLC1A4P43007 532 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 PLS1Q14651 629 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 SART3Q15020 963 aaKnown RBP12.24□□□□□ -0.45
PTPRN-218ENST00000497977 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-218ENST00000497977 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 SLFN13Q68D06 897 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 DPP9Q86TI2 863 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 ZNF589Q86UQ0 364 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-218ENST00000497977 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
PTPRN-218ENST00000497977 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms