RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IRF6O14896 467 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 HMGB1P09429 215 aaKnown RBP23.57■■□□□ 1.36
CTSD-206ENST00000497544 ZBTB48P10074 688 aaPredicted RBP23.57■■□□□ 1.36
CTSD-206ENST00000497544 MCM5P33992 734 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 NKX2-3Q8TAU0 364 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 CEP95Q96GE4 821 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 JAKMIP1Q96N16 626 aaKnown RBP23.57■■□□□ 1.36
CTSD-206ENST00000497544 ZKSCAN3Q9BRR0 538 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 UBAC1Q9BSL1 405 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 C22orf23Q9BZE7 217 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 MTMR4Q9NYA4 1195 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 CLIP2Q9UDT6 1046 aa23.57■■□□□ 1.36
CTSD-206ENST00000497544 IGKV6D-41A0A0C4DH26 115 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 ERICH2A1L162 156 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 TRIM75PA6NK02 468 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 CXCL11O14625 94 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 NMT2O60551 498 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 TTLL1O95922 423 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 EEF2P13639 858 aaKnown RBP23.56■■□□□ 1.36
CTSD-206ENST00000497544 GJA5P36382 358 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 ANAPC15P60006 121 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 CLEC10AQ8IUN9 316 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 MB21D2Q8IYB1 491 aaPredicted RBP23.56■■□□□ 1.36
CTSD-206ENST00000497544 IL17RBQ9NRM6 502 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 NYAP2Q9P242 653 aa23.56■■□□□ 1.36
CTSD-206ENST00000497544 USP17L10C9JJH3 530 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 SART3Q15020 963 aaKnown RBP23.55■■□□□ 1.36
CTSD-206ENST00000497544 CHST3Q7LGC8 479 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 ACER1Q8TDN7 264 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 TTC14Q96N46 770 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 FEZ1Q99689 392 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 STX8Q9UNK0 236 aa23.55■■□□□ 1.36
CTSD-206ENST00000497544 C19orf81C9J6K1 198 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 IFIT3O14879 490 aaKnown RBP23.54■■□□□ 1.36
CTSD-206ENST00000497544 SNAPC2Q13487 334 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 BLOC1S2Q6QNY1 142 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 DHX32Q7L7V1 743 aaKnown RBP23.54■■□□□ 1.36
CTSD-206ENST00000497544 SIAH1Q8IUQ4 282 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 ZSCAN10Q96SZ4 725 aaPredicted RBP23.54■■□□□ 1.36
CTSD-206ENST00000497544 TMEM106CQ9BVX2 250 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 SH2D4AQ9H788 454 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 KCNH4Q9UQ05 1017 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 GREB1LQ9C091 1923 aaPredicted RBP23.54■■□□□ 1.36
CTSD-206ENST00000497544 PHIPQ8WWQ0 1821 aa23.54■■□□□ 1.36
CTSD-206ENST00000497544 PRC1O43663 620 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
CTSD-206ENST00000497544 GTF2A2P52657 109 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 BACE1P56817 501 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 DGKHQ86XP1 1220 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 TM6SF1Q9BZW5 370 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 TMX2Q9Y320 296 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 MYH4Q9Y623 1939 aa23.53■■□□□ 1.36
CTSD-206ENST00000497544 A0A1W2PRG0 241 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 USP14P54578 494 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 MTMR2Q13614 643 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 ZYXQ15942 572 aaKnown RBP23.52■■□□□ 1.36
CTSD-206ENST00000497544 CD99L2Q8TCZ2 262 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 MKL1Q969V6 931 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 ZNF333Q96JL9 665 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 MTA3Q9BTC8 594 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 KIAA1683Q9H0B3 1180 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 TMOD4Q9NZQ9 345 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 TNKSO95271 1327 aa23.52■■□□□ 1.36
CTSD-206ENST00000497544 MANSC4A6NHS7 340 aaPredicted RBP23.51■■□□□ 1.35
CTSD-206ENST00000497544 ALDH1A1P00352 501 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 TOP1P11387 765 aaKnown RBP23.51■■□□□ 1.35
CTSD-206ENST00000497544 CETPP11597 493 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 RBM25P49756 843 aaKnown RBP23.51■■□□□ 1.35
CTSD-206ENST00000497544 ANTXR2P58335 489 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 TMEM67Q5HYA8 995 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 USP17L2Q6R6M4 530 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 TMEM87BQ96K49 555 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 ZSWIM6Q9HCJ5 1215 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 CYP46A1Q9Y6A2 500 aa23.51■■□□□ 1.35
CTSD-206ENST00000497544 RAD21O60216 631 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 NOVP48745 357 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 HMGCS2P54868 508 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 EXOSC10Q01780 885 aaKnown RBP23.5■■□□□ 1.35
CTSD-206ENST00000497544 WTAPQ15007 396 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 SH3D19Q5HYK7 790 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 IFIT1BQ5T764 474 aaKnown RBP23.5■■□□□ 1.35
CTSD-206ENST00000497544 RUFY3Q7L099 469 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 ENAHQ8N8S7 591 aaPredicted RBP23.5■■□□□ 1.35
CTSD-206ENST00000497544 ANKS1AQ92625 1134 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 ERO1AQ96HE7 468 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 GOPCQ9HD26 462 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 WDR19Q8NEZ3 1342 aa23.5■■□□□ 1.35
CTSD-206ENST00000497544 UNC80Q8N2C7 3258 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 CCL15-CCL14A0A0B4J2E2 113 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 A0A0G2JLL6 359 aaPredicted RBP23.49■■□□□ 1.35
CTSD-206ENST00000497544 CPA1P15085 419 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 RPS6KB1P23443 525 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 INHBEP58166 350 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 FGD1P98174 961 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 CAP1Q01518 475 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 CCL15Q16663 113 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 RCSD1Q6JBY9 416 aa23.49■■□□□ 1.35
CTSD-206ENST00000497544 GADL1Q6ZQY3 521 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms