RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 KCNH4Q9UQ05 1017 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 MYH4Q9Y623 1939 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 SLC10A3P09131 477 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 GOPCQ9HD26 462 aa25.52■■□□□ 1.68
C9orf3-222ENST00000496567 GJA5P36382 358 aa25.51■■□□□ 1.67
C9orf3-222ENST00000496567 MTMR2Q13614 643 aa25.51■■□□□ 1.67
C9orf3-222ENST00000496567 PAXIP1Q6ZW49 1069 aaPredicted RBP25.51■■□□□ 1.67
C9orf3-222ENST00000496567 AGXT2Q9BYV1 514 aa25.51■■□□□ 1.67
C9orf3-222ENST00000496567 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
C9orf3-222ENST00000496567 CCDC69A6NI79 296 aa25.5■■□□□ 1.67
C9orf3-222ENST00000496567 SNAPC2Q13487 334 aa25.5■■□□□ 1.67
C9orf3-222ENST00000496567 NFXL1Q6ZNB6 911 aa25.5■■□□□ 1.67
C9orf3-222ENST00000496567 LRRC47Q8N1G4 583 aaKnown RBP25.5■■□□□ 1.67
C9orf3-222ENST00000496567 GPHNQ9NQX3 736 aaPredicted RBP25.5■■□□□ 1.67
C9orf3-222ENST00000496567 HSPA6P17066 643 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 GTF2A2P52657 109 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 ANKRD1Q15327 319 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 SH3D19Q5HYK7 790 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 USP17L2Q6R6M4 530 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 SGMS1Q86VZ5 419 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 PNMA1Q8ND90 353 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 VCPKMTQ9H867 229 aa25.49■■□□□ 1.67
C9orf3-222ENST00000496567 ZYXQ15942 572 aaKnown RBP25.48■■□□□ 1.67
C9orf3-222ENST00000496567 GMCL1P1Q8NEA9 526 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 BRF1Q92994 677 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 TMOD4Q9NZQ9 345 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 A0A0G2JLL6 359 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-222ENST00000496567 HMGCS2P54868 508 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 MKRN3Q13064 507 aaKnown RBP25.48■■□□□ 1.67
C9orf3-222ENST00000496567 PRRT2Q7Z6L0 340 aaPredicted RBP25.48■■□□□ 1.67
C9orf3-222ENST00000496567 CATIPQ7Z7H3 387 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 LPAR1Q92633 364 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 SENP2Q9HC62 589 aa25.48■■□□□ 1.67
C9orf3-222ENST00000496567 FAM155AB1AL88 458 aaPredicted RBP25.47■■□□□ 1.67
C9orf3-222ENST00000496567 F5H6K3 240 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 RAD21O60216 631 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 ST18O60284 1047 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 KLRC3Q07444 240 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 CYP4F22Q6NT55 531 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 SYNE3Q6ZMZ3 975 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 C12orf42Q96LP6 360 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 SLC12A7Q9Y666 1083 aa25.47■■□□□ 1.67
C9orf3-222ENST00000496567 CETPP11597 493 aa25.46■■□□□ 1.67
C9orf3-222ENST00000496567 TOB2Q14106 344 aaPredicted RBP25.46■■□□□ 1.67
C9orf3-222ENST00000496567 FASTKD5Q7L8L6 764 aaKnown RBP25.46■■□□□ 1.67
C9orf3-222ENST00000496567 PROCA1Q8NCQ7 364 aaPredicted RBP25.46■■□□□ 1.67
C9orf3-222ENST00000496567 CAPNS2Q96L46 248 aa25.46■■□□□ 1.67
C9orf3-222ENST00000496567 EMILIN3Q9NT22 766 aa25.46■■□□□ 1.67
C9orf3-222ENST00000496567 MANSC4A6NHS7 340 aaPredicted RBP25.45■■□□□ 1.66
C9orf3-222ENST00000496567 SLFN13Q68D06 897 aa25.45■■□□□ 1.66
C9orf3-222ENST00000496567 ZNF654Q8IZM8 581 aa25.45■■□□□ 1.66
C9orf3-222ENST00000496567 MS4A4AQ96JQ5 239 aa25.45■■□□□ 1.66
C9orf3-222ENST00000496567 PTPRFP10586 1907 aa25.45■■□□□ 1.66
C9orf3-222ENST00000496567 NDUFB10O96000 172 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 AK2P54819 239 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 NOGQ13253 232 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 GRM1Q13255 1194 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 KLF18A0A0U1RQI7 1052 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 DDAH1O94760 285 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 CALM1P0DP23 149 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 CALM2P0DP24 149 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 CALM3P0DP25 149 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 APOBRQ0VD83 1088 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 APOA5Q6Q788 366 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 GADL1Q6ZQY3 521 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 SPICE1Q8N0Z3 855 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 DCAF4Q8WV16 495 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 GMCL1Q96IK5 515 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 MTMR7Q9Y216 660 aa25.44■■□□□ 1.66
C9orf3-222ENST00000496567 CCL15-CCL14A0A0B4J2E2 113 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 SLC1A4P43007 532 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 EVCP57679 992 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 INHBEP58166 350 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 HTRA3P83110 453 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 CCL15Q16663 113 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 BRPF3Q9ULD4 1205 aa25.43■■□□□ 1.66
C9orf3-222ENST00000496567 WDR46O15213 610 aaKnown RBP25.42■■□□□ 1.66
C9orf3-222ENST00000496567 VCAM1P19320 739 aa25.42■■□□□ 1.66
C9orf3-222ENST00000496567 TROAPQ12815 778 aa25.42■■□□□ 1.66
C9orf3-222ENST00000496567 KIAA1755Q5JYT7 1200 aa25.42■■□□□ 1.66
C9orf3-222ENST00000496567 MAP3K14Q99558 947 aa25.42■■□□□ 1.66
C9orf3-222ENST00000496567 NAP1L2Q9ULW6 460 aaPredicted RBP25.42■■□□□ 1.66
C9orf3-222ENST00000496567 ZBTB43O43298 467 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 SNHG28P0DPA3 235 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 PDHBP11177 359 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 RCAN1P53805 252 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 DGKZQ13574 1117 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 NUP133Q8WUM0 1156 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 LOC285556D6RIA3 1793 aa25.41■■□□□ 1.66
C9orf3-222ENST00000496567 TESPA1A2RU30 521 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-222ENST00000496567 BMP3P12645 472 aa25.4■■□□□ 1.66
C9orf3-222ENST00000496567 SREBF2Q12772 1141 aa25.4■■□□□ 1.66
C9orf3-222ENST00000496567 MOGSQ13724 837 aa25.4■■□□□ 1.66
C9orf3-222ENST00000496567 ZNF274Q96GC6 653 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-222ENST00000496567 AGTPBP1Q9UPW5 1226 aa25.4■■□□□ 1.66
C9orf3-222ENST00000496567 WDR33Q9C0J8 1336 aaKnown RBP25.4■■□□□ 1.66
C9orf3-222ENST00000496567 MCM2P49736 904 aa25.39■■□□□ 1.66
C9orf3-222ENST00000496567 PABPC4Q13310 644 aaKnown RBP eCLIP25.39■■□□□ 1.66
C9orf3-222ENST00000496567 CCDC96Q2M329 555 aa25.39■■□□□ 1.66
C9orf3-222ENST00000496567 ASPRV1Q53RT3 343 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms