RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 DOCK3Q8IZD9 2030 aa15.27■□□□□ 0.03
PTPRF-214ENST00000496043 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
PTPRF-214ENST00000496043 MINDY4BA8MYZ0 360 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 PATL2C9JE40 543 aaKnown RBP15.26■□□□□ 0.03
PTPRF-214ENST00000496043 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
PTPRF-214ENST00000496043 SLC34A2O95436 690 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 APPP05067 770 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 TRIM32Q13049 653 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 PI4K2BQ8TCG2 481 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 TRIB2Q92519 343 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 TANGO6Q9C0B7 1094 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
PTPRF-214ENST00000496043 CENPFP49454 3210 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 GPAA1O43292 621 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 EEF2P13639 858 aaKnown RBP15.25■□□□□ 0.03
PTPRF-214ENST00000496043 ZKSCAN1P17029 563 aaPredicted RBP15.25■□□□□ 0.03
PTPRF-214ENST00000496043 MX1P20591 662 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 PTPREP23469 700 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 DSG3P32926 999 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 AAMPQ13685 434 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 KIAA1755Q5JYT7 1200 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 MB21D1Q8N884 522 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 OTUD7AQ8TE49 926 aaPredicted RBP15.25■□□□□ 0.03
PTPRF-214ENST00000496043 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
PTPRF-214ENST00000496043 TDO2P48775 406 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 HDAC1Q13547 482 aaPredicted RBP15.24■□□□□ 0.03
PTPRF-214ENST00000496043 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
PTPRF-214ENST00000496043 SPICE1Q8N0Z3 855 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 NACAP1Q9BZK3 213 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 ZNF287Q9HBT7 754 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 NR2E3Q9Y5X4 410 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 NAV1Q8NEY1 1877 aa15.24■□□□□ 0.03
PTPRF-214ENST00000496043 H0YGN5 161 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 M0R2C6 588 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 WDR46O15213 610 aaKnown RBP15.23■□□□□ 0.03
PTPRF-214ENST00000496043 STRNO43815 780 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 FLOT1O75955 427 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
PTPRF-214ENST00000496043 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
PTPRF-214ENST00000496043 CCL14Q16627 93 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 MAP3K21Q5TCX8 1036 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 CLEC10AQ8IUN9 316 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 STK11IPQ8N1F8 1099 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 ANKLE1Q8NAG6 615 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 APBA2Q99767 749 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 MOV10L1Q9BXT6 1211 aaKnown RBP15.23■□□□□ 0.03
PTPRF-214ENST00000496043 SPATC1LQ9H0A9 340 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 GOPCQ9HD26 462 aa15.23■□□□□ 0.03
PTPRF-214ENST00000496043 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
PTPRF-214ENST00000496043 RASA1P20936 1047 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 HABP4Q5JVS0 413 aaKnown RBP15.22■□□□□ 0.03
PTPRF-214ENST00000496043 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 MFSD14CQ5VZR4 134 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 SHCBP1Q8NEM2 672 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 PAWRQ96IZ0 340 aaKnown RBP15.22■□□□□ 0.03
PTPRF-214ENST00000496043 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTPRF-214ENST00000496043 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-214ENST00000496043 STAP2Q9UGK3 403 aa15.22■□□□□ 0.03
PTPRF-214ENST00000496043 RAD21O60216 631 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 HOXC6P09630 235 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 GRB14Q14449 540 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 PLS1Q14651 629 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-214ENST00000496043 DPP9Q86TI2 863 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 EVI5LQ96CN4 794 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
PTPRF-214ENST00000496043 MROH8Q9H579 483 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 EPB41L4AQ9HCS5 686 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-214ENST00000496043 NYAP2Q9P242 653 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 OGDHLQ9ULD0 1010 aa15.21■□□□□ 0.03
PTPRF-214ENST00000496043 EVI5O60447 810 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 SLC3A2P08195 630 aaKnown RBP15.2■□□□□ 0.02
PTPRF-214ENST00000496043 ERCC3P19447 782 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 PDE1AP54750 535 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 CLIP2Q9UDT6 1046 aa15.2■□□□□ 0.02
PTPRF-214ENST00000496043 COLQQ9Y215 455 aaPredicted RBP15.2■□□□□ 0.02
PTPRF-214ENST00000496043 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 BAZ2AQ9UIF9 1905 aaKnown RBP15.19■□□□□ 0.02
PTPRF-214ENST00000496043 SLC25A27O95847 323 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
PTPRF-214ENST00000496043 PDE4BQ07343 736 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 NCAPG2Q86XI2 1143 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 NAPBQ9H115 298 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 FLRT1Q9NZU1 646 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
PTPRF-214ENST00000496043 MYH7P12883 1935 aa15.18■□□□□ 0.02
PTPRF-214ENST00000496043 F5H6K3 240 aa15.18■□□□□ 0.02
PTPRF-214ENST00000496043 PRDM1O75626 825 aa15.18■□□□□ 0.02
PTPRF-214ENST00000496043 ADORA2AP29274 412 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms