RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TSHZ2Q9NRE2 1034 aa22.81■■□□□ 1.24
ATG3-208ENST00000495756 SLC12A7Q9Y666 1083 aa22.81■■□□□ 1.24
ATG3-208ENST00000495756 KLF18A0A0U1RQI7 1052 aa22.8■■□□□ 1.24
ATG3-208ENST00000495756 USP17L10C9JJH3 530 aa22.8■■□□□ 1.24
ATG3-208ENST00000495756 CD2BP2O95400 341 aaKnown RBP22.8■■□□□ 1.24
ATG3-208ENST00000495756 BACE1P56817 501 aa22.8■■□□□ 1.24
ATG3-208ENST00000495756 CATIPQ7Z7H3 387 aa22.8■■□□□ 1.24
ATG3-208ENST00000495756 ZNF654Q8IZM8 581 aa22.8■■□□□ 1.24
ATG3-208ENST00000495756 IRF6O14896 467 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 GJA5P36382 358 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 MTMR2Q13614 643 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 APOA5Q6Q788 366 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
ATG3-208ENST00000495756 GMCL1P1Q8NEA9 526 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 WNK4Q96J92 1243 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 TPCN1Q9ULQ1 816 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 F5H6K3 240 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 ZNF157P51786 506 aaPredicted RBP22.79■■□□□ 1.24
ATG3-208ENST00000495756 KLRC3Q07444 240 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 TROAPQ12815 778 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 ZYXQ15942 572 aaKnown RBP22.79■■□□□ 1.24
ATG3-208ENST00000495756 RGMBQ6NW40 437 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 HHIPL1Q96JK4 782 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 VCPKMTQ9H867 229 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 GOPCQ9HD26 462 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 CREBZFQ9NS37 354 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 LIMCH1Q9UPQ0 1083 aa22.79■■□□□ 1.24
ATG3-208ENST00000495756 C19orf81C9J6K1 198 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 CXCL11O14625 94 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 DDAH1O94760 285 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 MCM2P49736 904 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 USP14P54578 494 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 SYNE3Q6ZMZ3 975 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 ZNF274Q96GC6 653 aaPredicted RBP22.78■■□□□ 1.24
ATG3-208ENST00000495756 MYL10Q9BUA6 226 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 NAP1L2Q9ULW6 460 aaPredicted RBP22.78■■□□□ 1.24
ATG3-208ENST00000495756 KCNH4Q9UQ05 1017 aa22.78■■□□□ 1.24
ATG3-208ENST00000495756 GOLGA8BA8MQT2 603 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 ZBTB43O43298 467 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 RAD21O60216 631 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 NDUFB10O96000 172 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 ZBTB48P10074 688 aaPredicted RBP22.77■■□□□ 1.24
ATG3-208ENST00000495756 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 RASAL3Q86YV0 1011 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 MTMR7Q9Y216 660 aa22.77■■□□□ 1.24
ATG3-208ENST00000495756 PTPRFP10586 1907 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 PDIA3P30101 505 aaKnown RBP22.76■■□□□ 1.23
ATG3-208ENST00000495756 RCAN1P53805 252 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 HMGCS2P54868 508 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 C1QTNF8P60827 252 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 KIAA1755Q5JYT7 1200 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 SLFN13Q68D06 897 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 USP17L2Q6R6M4 530 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 MICU3Q86XE3 530 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 RAB11FIP4Q86YS3 637 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 SPICE1Q8N0Z3 855 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 NUP133Q8WUM0 1156 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 SNX21Q969T3 373 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 EMILIN3Q9NT22 766 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 HPS5Q9UPZ3 1129 aa22.76■■□□□ 1.23
ATG3-208ENST00000495756 CALM1P0DP23 149 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 CALM2P0DP24 149 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 CALM3P0DP25 149 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 SNHG28P0DPA3 235 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 PDHBP11177 359 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 RXRAP19793 462 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 DGKZQ13574 1117 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 ME3Q16798 604 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 SH3D19Q5HYK7 790 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 RASGRP2Q7LDG7 609 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 LPAR1Q92633 364 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 CHMP4CQ96CF2 233 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 GMCL1Q96IK5 515 aa22.75■■□□□ 1.23
ATG3-208ENST00000495756 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
ATG3-208ENST00000495756 SNAPC2Q13487 334 aa22.74■■□□□ 1.23
ATG3-208ENST00000495756 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
ATG3-208ENST00000495756 DCAF4Q8WV16 495 aa22.74■■□□□ 1.23
ATG3-208ENST00000495756 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
ATG3-208ENST00000495756 MAP3K14Q99558 947 aa22.74■■□□□ 1.23
ATG3-208ENST00000495756 LARGE1O95461 756 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 SLC10A3P09131 477 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 SLC1A4P43007 532 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 MKRN3Q13064 507 aaKnown RBP22.73■■□□□ 1.23
ATG3-208ENST00000495756 GRM4Q14833 912 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 FANCBQ8NB91 859 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 CCDC102AQ96A19 550 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 ZSCAN31Q96LW9 406 aaPredicted RBP22.73■■□□□ 1.23
ATG3-208ENST00000495756 TMOD4Q9NZQ9 345 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 NID2Q14112 1375 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 RASSF10A6NK89 507 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 GOLGA8AA7E2F4 631 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 VCAM1P19320 739 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 METAP2P50579 478 aaKnown RBP eCLIP22.73■■□□□ 1.23
ATG3-208ENST00000495756 GTF2A2P52657 109 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 STK3Q13188 491 aa22.73■■□□□ 1.23
ATG3-208ENST00000495756 CTCFLQ8NI51 663 aaPredicted RBP22.73■■□□□ 1.23
ATG3-208ENST00000495756 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
ATG3-208ENST00000495756 FAM155AB1AL88 458 aaPredicted RBP22.72■■□□□ 1.23
ATG3-208ENST00000495756 PFKFB2O60825 505 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms