RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 FAM53CQ9NYF3 392 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 PCDHA5Q9Y5H7 936 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 FANCGO15287 622 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 POLR2DO15514 142 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 CBFA2T2O43439 604 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 APBA3O96018 575 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 MMP1P03956 469 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 DHX8Q14562 1220 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 BMS1Q14692 1282 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 MNS1Q8NEH6 495 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 KCNQ5Q9NR82 932 aa10.37□□□□□ -0.75
TM9SF4-207ENST00000495749 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 G3V3G9 751 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 PPP6R2O75170 966 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CACNB3P54284 484 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 TXNRD1Q16881 649 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 VSTM4Q8IW00 320 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CD209Q9NNX6 404 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 KCNH3Q9ULD8 1083 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 ATRNO75882 1429 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CCP110O43303 1012 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 DEXIO95424 95 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 BTDP43251 543 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 ST5P78524 1137 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 PDE4BQ07343 736 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 RESP18Q5W5W9 173 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 EPSTI1Q96J88 318 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 PLIN2Q99541 437 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CARD6Q9BX69 1037 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 FHOD1Q9Y613 1164 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 SPEF2Q9C093 1822 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 TUBB4AP04350 444 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 BMP6P22004 513 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 NLRP5P59047 1200 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 TROAPQ12815 778 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 KRBA2Q6ZNG9 492 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 PIK3AP1Q6ZUJ8 805 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 REXO1L1PQ8IX06 675 aa10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 NOL10Q9BSC4 688 aaKnown RBP10.36□□□□□ -0.75
TM9SF4-207ENST00000495749 WDR19Q8NEZ3 1342 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 TSPY3P0CV98 308 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 TSPY8P0CW00 308 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 PNMA6AP0CW24 399 aaPredicted RBP10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 MCM7P33993 719 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 PKN1Q16512 942 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 KLHL10Q6JEL2 608 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 ZNF804AQ7Z570 1209 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 DHX58Q96C10 678 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 EPC1Q9H2F5 836 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 INTS13Q9NVM9 706 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 XDHP47989 1333 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 PHLPP2Q6ZVD8 1323 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 MYH3P11055 1940 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 FAM196BA6NMK8 535 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 TEX11Q8IYF3 940 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 BRIP1Q9BX63 1249 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 KAT14Q9H8E8 782 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 IL17RBQ9NRM6 502 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 SERTAD1Q9UHV2 236 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
TM9SF4-207ENST00000495749 VWA3AA6NCI4 1184 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 CUTAO60888 179 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 CDK11BP21127 795 aaKnown RBP10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 TMCO3Q6UWJ1 677 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 UBA5Q9GZZ9 404 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 CSRNP2Q9H175 543 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 PPP2R2CQ9Y2T4 447 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 SMYD4Q8IYR2 804 aaPredicted RBP10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 KRI1Q8N9T8 703 aaKnown RBP10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 TBC1D16Q8TBP0 767 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 ARGLU1Q9NWB6 273 aaPredicted RBP10.34□□□□□ -0.75
TM9SF4-207ENST00000495749 ARHGAP6O43182 974 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 TADA3O75528 432 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 SEC31AO94979 1220 aaKnown RBP10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 STX17P56962 302 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 GNG11P61952 73 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 TCP10Q12799 353 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 ZNF772Q68DY9 489 aaPredicted RBP10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 TMEM139Q8IV31 216 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 PNMA1Q8ND90 353 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 WDR66Q8TBY9 1149 aa10.33□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms