RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 FBXO24O75426 580 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 CYP7A1P22680 504 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 LLGL2Q6P1M3 1020 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 HID1Q8IV36 788 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 IGDCC3Q8IVU1 814 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 DNAJB8Q8NHS0 232 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 PPP1R13LQ8WUF5 828 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 COX4I2Q96KJ9 171 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 GPR62Q9BZJ7 368 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 SERPINA10Q9UK55 444 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 ZNF281Q9Y2X9 895 aa4.29□□□□□ -1.72
PTPN12-212ENST00000494248 HRKO00198 91 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 FFAR3O14843 346 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 MAGEA10P43363 369 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-212ENST00000494248 TEKQ02763 1124 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 ZFYVE27Q5T4F4 411 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 MZB1Q8WU39 189 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 DHX38Q92620 1227 aaKnown RBP4.28□□□□□ -1.72
PTPN12-212ENST00000494248 CCDC97Q96F63 343 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-212ENST00000494248 PWWP2AQ96N64 755 aa4.28□□□□□ -1.72
PTPN12-212ENST00000494248 K7ESM1 405 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 LRRN2O75325 713 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 SLPIP03973 132 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 LTKP29376 864 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 GRK4P32298 578 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 ETF1P62495 437 aaKnown RBP4.27□□□□□ -1.73
PTPN12-212ENST00000494248 YBX1P67809 324 aaKnown RBP4.27□□□□□ -1.73
PTPN12-212ENST00000494248 ADAM17P78536 824 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 PLCB3Q01970 1234 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 PDE3BQ13370 1112 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 FERMT3Q86UX7 667 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 SPPL2CQ8IUH8 684 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 DTWD2Q8NBA8 298 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 GAL3ST3Q96A11 431 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 MRIQ9BWK5 157 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 EGFL7Q9UHF1 273 aa4.27□□□□□ -1.73
PTPN12-212ENST00000494248 SLURP1P55000 103 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 CHRNEQ04844 493 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 WIPI1Q5MNZ9 446 aaPredicted RBP4.26□□□□□ -1.73
PTPN12-212ENST00000494248 HDXQ7Z353 690 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 ANKS4BQ8N8V4 417 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 TRIT1Q9H3H1 467 aaKnown RBP4.26□□□□□ -1.73
PTPN12-212ENST00000494248 GPATCH2Q9NW75 528 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 PPP4R2Q9NY27 417 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 TJP2Q9UDY2 1190 aa4.26□□□□□ -1.73
PTPN12-212ENST00000494248 H3BRB1 525 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 NDUFB5O43674 189 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 ZNF827Q17R98 1081 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 LDHDQ86WU2 507 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 Q8N1X5 172 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 TUT1Q9H6E5 874 aaKnown RBP4.25□□□□□ -1.73
PTPN12-212ENST00000494248 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
PTPN12-212ENST00000494248 DUSP10Q9Y6W6 482 aa4.25□□□□□ -1.73
PTPN12-212ENST00000494248 SHISA3A0PJX4 238 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 USP2O75604 605 aaPredicted RBP4.24□□□□□ -1.73
PTPN12-212ENST00000494248 CELA3AP09093 270 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 SERPINB4P48594 390 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 NCKAP1LP55160 1127 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 LRRC14Q15048 493 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPN12-212ENST00000494248 PCNX4Q63HM2 1172 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 SCARA3Q6AZY7 606 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 ADGRG2Q8IZP9 1017 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 NLRP2Q9NX02 1062 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 KLHL14Q9P2G3 628 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 PALD1Q9ULE6 856 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 CYP8B1Q9UNU6 501 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 PCDHA5Q9Y5H7 936 aa4.24□□□□□ -1.73
PTPN12-212ENST00000494248 A0A1B0GTL3 188 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 GFRA2O00451 464 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 PPP1R15AO75807 674 aaPredicted RBP4.23□□□□□ -1.73
PTPN12-212ENST00000494248 ETV3P41162 512 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 KCNC1P48547 511 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 KIR3DS1Q14943 382 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 UBXN11Q5T124 520 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 MRPL41Q8IXM3 137 aaKnown RBP4.23□□□□□ -1.73
PTPN12-212ENST00000494248 CITED4Q96RK1 184 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 PLCD4Q9BRC7 762 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 CEP131Q9UPN4 1083 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 SAMM50Q9Y512 469 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 TNFRSF18Q9Y5U5 241 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 SNCAIPQ9Y6H5 919 aa4.23□□□□□ -1.73
PTPN12-212ENST00000494248 NRDCO43847 1150 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 DUSP4Q13115 394 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 GLYCTKQ8IVS8 523 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 ALKBH8Q96BT7 664 aaKnown RBP4.22□□□□□ -1.73
PTPN12-212ENST00000494248 TMEM87BQ96K49 555 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 RBM15Q96T37 977 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPN12-212ENST00000494248 CRTAC1Q9NQ79 661 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 TACC3Q9Y6A5 838 aa4.22□□□□□ -1.73
PTPN12-212ENST00000494248 C1QTNF3-AMACRE9PGA6 284 aa4.21□□□□□ -1.74
PTPN12-212ENST00000494248 VWA3BQ502W6 1294 aa4.21□□□□□ -1.74
PTPN12-212ENST00000494248 CEP44Q9C0F1 390 aa4.21□□□□□ -1.74
PTPN12-212ENST00000494248 SMPD4Q9NXE4 827 aa4.21□□□□□ -1.74
PTPN12-212ENST00000494248 RBM47A0AV96 593 aaKnown RBP4.2□□□□□ -1.74
PTPN12-212ENST00000494248 BUB1BO60566 1050 aaPredicted RBP4.2□□□□□ -1.74
PTPN12-212ENST00000494248 ITGB3P05106 788 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 IGFBP6P24592 240 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms