RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 MINDY4BA8MYZ0 360 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 H0YGN5 161 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 ERC2O15083 957 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 FARP2O94887 1054 aaPredicted RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 MX1P20591 662 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
UFD1-210ENST00000494054 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
UFD1-210ENST00000494054 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
UFD1-210ENST00000494054 RASA1P20936 1047 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 PTPREP23469 700 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 DSG3P32926 999 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 RGS2P41220 211 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 CCNA1P78396 465 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
UFD1-210ENST00000494054 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 IFNL3Q8IZI9 196 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 LPAR1Q92633 364 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 DPF3Q92784 378 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 KANSL2Q9H9L4 492 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 HOXC10Q9NYD6 342 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 CEP290O15078 2479 aa11.69□□□□□ -0.54
UFD1-210ENST00000494054 MYH8P13535 1937 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 RLFQ13129 1914 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 SLC15A5A6NIM6 579 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 PATL2C9JE40 543 aaKnown RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 FLOT1O75955 427 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 APPP05067 770 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 GNAT2P19087 354 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 CACNB2Q08289 660 aaPredicted RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 DIS3LQ8TF46 1054 aaKnown RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 ATG4CQ96DT6 458 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 PAWRQ96IZ0 340 aaKnown RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 FSD1Q9BTV5 496 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 MOV10L1Q9BXT6 1211 aaKnown RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
UFD1-210ENST00000494054 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
UFD1-210ENST00000494054 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 PRDM1O75626 825 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 CCND3P30281 292 aaPredicted RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 TDO2P48775 406 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 GRB14Q14449 540 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 TRMT44Q8IYL2 757 aaKnown RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 NPLOC4Q8TAT6 608 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 GCC1Q96CN9 775 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 APBA2Q99767 749 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 HTATIP2Q9BUP3 242 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 SPATC1LQ9H0A9 340 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 FBXO28Q9NVF7 368 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
UFD1-210ENST00000494054 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
UFD1-210ENST00000494054 IGKV6D-41A0A0C4DH26 115 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 FOXP2O15409 715 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 HOXC6P09630 235 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 CAPN2P17655 700 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 ERCC3P19447 782 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 PDE1AP54750 535 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 LRRFIP1Q32MZ4 808 aaKnown RBP11.66□□□□□ -0.54
UFD1-210ENST00000494054 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
UFD1-210ENST00000494054 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
UFD1-210ENST00000494054 IGHA2P01877 340 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 IGHDP01880 384 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 PLS1Q14651 629 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 TMEM132BQ14DG7 1078 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 LHX8Q68G74 356 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 NECAB2Q7Z6G3 386 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 SHCBP1Q8NEM2 672 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 NUP88Q99567 741 aaPredicted RBP11.65□□□□□ -0.54
UFD1-210ENST00000494054 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
UFD1-210ENST00000494054 ADAMTS5Q9UNA0 930 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 IVNS1ABPQ9Y6Y0 642 aa11.65□□□□□ -0.54
UFD1-210ENST00000494054 F5H6K3 240 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms