RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 AOC3Q16853 763 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 EARS2Q5JPH6 523 aaKnown RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 STAG2Q8N3U4 1231 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 DNAJC25Q9H1X3 360 aa12.26□□□□□ -0.45
CLCN6-208ENST00000494028 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
CLCN6-208ENST00000494028 ESPNB1AK53 854 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 G3V3G9 751 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 WNT7AO00755 349 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 GNAQP50148 359 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 HS1BP3Q53T59 392 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 NOM1Q5C9Z4 860 aaKnown RBP12.25□□□□□ -0.45
CLCN6-208ENST00000494028 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
CLCN6-208ENST00000494028 SPZ1Q9BXG8 430 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 KCNQ5Q9NR82 932 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 STX8Q9UNK0 236 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
CLCN6-208ENST00000494028 A0A087WWV3 80 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-208ENST00000494028 CYTH3O43739 400 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 TOP1P11387 765 aaKnown RBP12.24□□□□□ -0.45
CLCN6-208ENST00000494028 AKR1B1P15121 316 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 PTPREP23469 700 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 SHMT1P34896 483 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 HDLBPQ00341 1268 aaKnown RBP12.24□□□□□ -0.45
CLCN6-208ENST00000494028 GRIN1Q05586 938 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 NFIAQ12857 509 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 WWC2Q6AWC2 1192 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 LUZP1Q86V48 1076 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.45
CLCN6-208ENST00000494028 CLIC6Q96NY7 704 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 EHD4Q9H223 541 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 PCDHAC2Q9Y5I4 1007 aa12.24□□□□□ -0.45
CLCN6-208ENST00000494028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-208ENST00000494028 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ZNF202O95125 648 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ADCY5O95622 1261 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-208ENST00000494028 SYKP43405 635 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 IQCB1Q15051 598 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ZSCAN30Q86W11 494 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 DAGLBQ8NCG7 672 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 SUPT20HQ8NEM7 779 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ERCC4Q92889 916 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-208ENST00000494028 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 NOL7Q9UMY1 257 aaKnown RBP12.23□□□□□ -0.45
CLCN6-208ENST00000494028 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
CLCN6-208ENST00000494028 ATRNL1Q5VV63 1379 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 STXBP3O00186 592 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 CAVIN2O95810 425 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 ZNF165P49910 485 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 LRRC47Q8N1G4 583 aaKnown RBP12.22□□□□□ -0.45
CLCN6-208ENST00000494028 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 ANO10Q9NW15 660 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 SERPINB13Q9UIV8 391 aa12.22□□□□□ -0.45
CLCN6-208ENST00000494028 M0R2N6 131 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 C21orf2O43822 256 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 BMP15O95972 392 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 GOLGA8HP0CJ92 632 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 SNHG28P0DPA3 235 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 PDHBP11177 359 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 CALML3P27482 149 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 NLRP5P59047 1200 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 METTL16Q86W50 562 aaKnown RBP12.21□□□□□ -0.45
CLCN6-208ENST00000494028 CEP57L1Q8IYX8 460 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 BLIDQ8IZY5 108 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.45
CLCN6-208ENST00000494028 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
CLCN6-208ENST00000494028 MRIQ9BWK5 157 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms