RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 AFAP1Q8N556 730 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MIGA1Q8NAN2 632 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TSC1Q92574 1164 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 IWS1Q96ST2 819 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SAR1BQ9Y6B6 198 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SPDYE2BA6NHP3 402 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TRPA1O75762 1119 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 GCNT3O95395 438 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SPDYE6P0CI01 402 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 IL9RQ01113 521 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 APBA1Q02410 837 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ANO1Q5XXA6 986 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 RINT1Q6NUQ1 792 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 PDXDC1Q6P996 788 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ZNF449Q6P9G9 518 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TRIM58Q8NG06 486 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 RUNDC3BQ96NL0 473 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SLF1Q9BQI6 1058 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MIS12Q9H081 205 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 GINS2Q9Y248 185 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ITM2BQ9Y287 266 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 CAPN9O14815 690 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SCYL2Q6P3W7 929 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 U2AF1L4Q8WU68 220 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ZC3H12CQ9C0D7 883 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 HYOU1Q9Y4L1 999 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 IL16Q14005 1332 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 GTPBP10A4D1E9 387 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TRIM37O94972 964 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TXKP42681 527 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 LIG3P49916 1009 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 KRT80Q6KB66 452 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 NELFBQ8WX92 580 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 CCDC51Q96ER9 411 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ANO3Q9BYT9 981 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MRPL44Q9H9J2 332 aaKnown RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 SLC13A4Q9UKG4 626 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TTI1O43156 1089 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MAP3K7O43318 606 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ATF7P17544 494 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-221ENST00000493795 RXRAP19793 462 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 NME9Q86XW9 330 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 MAPK8IP1Q9UQF2 711 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 IVNS1ABPQ9Y6Y0 642 aa8.63□□□□□ -1.03
BRCA1-221ENST00000493795 PSDA5PKW4 1024 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 NR1I2O75469 434 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 SRGAP2BP0DMP2 458 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 MYCLP12524 364 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 POLR2BP30876 1174 aaKnown RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 RCN2Q14257 317 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 HERC4Q5GLZ8 1057 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 SNX29Q8TEQ0 813 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 PARD3BQ8TEW8 1205 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ATP6V1E2Q96A05 226 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TRIM15Q9C019 465 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TXLNGQ9NUQ3 528 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 LRRC9Q6ZRR7 1453 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ARHGAP44Q17R89 818 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 MAEAQ7L5Y9 396 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 DCLK2Q8N568 766 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TUBB6Q9BUF5 446 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 LSM14BQ9BX40 385 aaKnown RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 MED4Q9NPJ6 270 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ANGPTL2Q9UKU9 493 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 DAAM1Q9Y4D1 1078 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 KRT10P13645 584 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TNNI1P19237 187 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ATP8B2P98198 1209 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TBCCQ15814 346 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 GRAMD4Q6IC98 578 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 RAPH1Q70E73 1250 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 CCDC197Q8NCU1 140 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 GOLGA5Q8TBA6 731 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ST7Q9NRC1 585 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 EMILIN1Q9Y6C2 1016 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 GRM8O00222 908 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 KCNK3O14649 394 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ADCY7P51828 1080 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 LMBR1LQ6UX01 489 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 RRAGAQ7L523 313 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 MCUQ8NE86 351 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
BRCA1-221ENST00000493795 CENPKQ9BS16 269 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 NEUROG2Q9H2A3 272 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 LRWD1Q9UFC0 647 aa8.62□□□□□ -1.03
BRCA1-221ENST00000493795 KCNA4P22459 653 aa8.61□□□□□ -1.03
BRCA1-221ENST00000493795 OCA2Q04671 838 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms