RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KANK3Q6NY19 840 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
PHACTR4-204ENST00000493669 EP400Q96L91 3159 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 OFD1O75665 1012 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 NLRP5P59047 1200 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 TPM4P67936 248 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 SPZ1Q9BXG8 430 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 IKBKBO14920 756 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 TOP1P11387 765 aaKnown RBP12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 SWAP70Q9UH65 585 aa12.36□□□□□ -0.43
PHACTR4-204ENST00000493669 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 H0YIN7 160 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 DPCR1Q3MIW9 517 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 CERS5Q8N5B7 392 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 G3V3G9 751 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 GABPAQ06546 454 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 AOPEPQ8N6M6 819 aa12.35□□□□□ -0.43
PHACTR4-204ENST00000493669 MYO1BO43795 1136 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 LONRF3Q496Y0 759 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 HDLBPQ00341 1268 aaKnown RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 EARS2Q5JPH6 523 aaKnown RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.431e-8■■■■□ 19.3
PHACTR4-204ENST00000493669 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
PHACTR4-204ENST00000493669 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 STRIP1Q5VSL9 837 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 TTC12Q9H892 705 aaPredicted RBP12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 hCG_1984214I3L0E3 225 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 POSTNQ15063 836 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
PHACTR4-204ENST00000493669 KLRF2D3W0D1 207 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 M0R2N6 131 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 POLR2DO15514 142 aaKnown RBP12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 TERF1P54274 439 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 GRIN1Q05586 938 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 PNOCQ13519 176 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 CEP95Q96GE4 821 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 EHD4Q9H223 541 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 DACH1Q9UI36 760 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 SERPINB13Q9UIV8 391 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 IGKV6D-41A0A0C4DH26 115 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 NEMFO60524 1076 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 PIK3AP1Q6ZUJ8 805 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
PHACTR4-204ENST00000493669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms