RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 BAG6P46379 1132 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 CEP57Q86XR8 500 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 DEPTORQ8TB45 409 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 NACA2Q9H009 215 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
BRAT1-206ENST00000493232 PTPRTO14522 1441 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
BRAT1-206ENST00000493232 PEX26Q7Z412 305 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 USP17L12C9JPN9 530 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 USP17L21D6R901 530 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 JAK2O60674 1132 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 ADALQ6DHV7 355 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 USTQ9Y2C2 406 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
BRAT1-206ENST00000493232 TPH2Q8IWU9 490 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 BLIDQ8IZY5 108 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 ABCC4O15439 1325 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 APBA3O96018 575 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
BRAT1-206ENST00000493232 PHKG2P15735 406 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 SLFN12Q8IYM2 578 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 ZBTB38Q8NAP3 1195 aaPredicted RBP18.04■□□□□ 0.48
BRAT1-206ENST00000493232 SMCR8Q8TEV9 937 aaPredicted RBP18.04■□□□□ 0.48
BRAT1-206ENST00000493232 SPC25Q9HBM1 224 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 NDUFB9Q9Y6M9 179 aa18.04■□□□□ 0.48
BRAT1-206ENST00000493232 ZWINTO95229 277 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
BRAT1-206ENST00000493232 RNASE9P60153 205 aaKnown RBP18.03■□□□□ 0.48
BRAT1-206ENST00000493232 GLG1Q92896 1179 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 PFDN4Q9NQP4 134 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 PARP2Q9UGN5 583 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 TNNI1P19237 187 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 NOSTRINQ8IVI9 506 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 IFNL3Q8IZI9 196 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 N4BP1O75113 896 aaKnown RBP18.03■□□□□ 0.48
BRAT1-206ENST00000493232 RPGRIP1Q96KN7 1286 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 CARD6Q9BX69 1037 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 PLCB1Q9NQ66 1216 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 SERTAD1Q9UHV2 236 aa18.03■□□□□ 0.48
BRAT1-206ENST00000493232 ZBTB8OSQ8IWT0 167 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 MYOCDQ8IZQ8 938 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 ZMYM6O95789 1325 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 GOLGA6CA6NDK9 693 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 LPXNO60711 386 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 DDAH1O94760 285 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 GOLGA6DP0CG33 693 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 PRKG1Q13976 671 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 MCF2L2Q86YR7 1114 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 CCDC105Q8IYK2 499 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 GOLGA6AQ9NYA3 693 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 XRCC5P13010 732 aaKnown RBP18.02■□□□□ 0.48
BRAT1-206ENST00000493232 RAD51AP2Q09MP3 1159 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.48
BRAT1-206ENST00000493232 GPBP1Q86WP2 473 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 RIOK1Q9BRS2 568 aaKnown RBP18.02■□□□□ 0.48
BRAT1-206ENST00000493232 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.48
BRAT1-206ENST00000493232 PBRM1Q86U86 1689 aa18.02■□□□□ 0.47
BRAT1-206ENST00000493232 DISP1Q96F81 1524 aa18.02■□□□□ 0.47
BRAT1-206ENST00000493232 PDE6AP16499 860 aa18.02■□□□□ 0.47
BRAT1-206ENST00000493232 PABPC4Q13310 644 aaKnown RBP eCLIP18.02■□□□□ 0.47
BRAT1-206ENST00000493232 HHATQ5VTY9 493 aa18.02■□□□□ 0.47
BRAT1-206ENST00000493232 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.47
BRAT1-206ENST00000493232 IFIH1Q9BYX4 1025 aaKnown RBP18.02■□□□□ 0.47
BRAT1-206ENST00000493232 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
BRAT1-206ENST00000493232 TRIM31Q9BZY9 425 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 STAT1P42224 750 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 MTX1Q13505 466 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 RAB17Q9H0T7 212 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 BLMP54132 1417 aaPredicted RBP18.01■□□□□ 0.47
BRAT1-206ENST00000493232 NDUFAB1O14561 156 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 ATP11AP98196 1134 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 NEDD9Q14511 834 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 ARHGEF16Q5VV41 709 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 PFKFB2O60825 505 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 KLHL7Q8IXQ5 586 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 FANCBQ8NB91 859 aa18.01■□□□□ 0.47
BRAT1-206ENST00000493232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
BRAT1-206ENST00000493232 BRD1O95696 1058 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 TRIML1Q8N9V2 468 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
BRAT1-206ENST00000493232 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 GABPAQ06546 454 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 ME3Q16798 604 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 CCDC89Q8N998 374 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 MLXIPQ9HAP2 919 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 AMFRQ9UKV5 643 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 CEP170Q5SW79 1584 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 GOLGA6BA6NDN3 693 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 I3L4J1 428 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
BRAT1-206ENST00000493232 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
BRAT1-206ENST00000493232 USP44Q9H0E7 712 aa18■□□□□ 0.47
BRAT1-206ENST00000493232 FAM207AQ9NSI2 230 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms