RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 SPATA31A1Q5TZJ5 1347 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 USP17L21D6R901 530 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 CASQ1P31415 396 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 STX17P56962 302 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 BMS1Q14692 1282 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 DESI2Q9BSY9 194 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 BRMS1Q9HCU9 246 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 ADD3Q9UEY8 706 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 AKR1B15C9JRZ8 316 aaPredicted RBP18.33■□□□□ 0.53
SEMA4D-220ENST00000492386 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.53
SEMA4D-220ENST00000492386 MTF1Q14872 753 aa18.33■□□□□ 0.53
SEMA4D-220ENST00000492386 SMYD4Q8IYR2 804 aaPredicted RBP18.33■□□□□ 0.53
SEMA4D-220ENST00000492386 BAZ2BQ9UIF8 2168 aaKnown RBP18.33■□□□□ 0.53
SEMA4D-220ENST00000492386 NRAPQ86VF7 1730 aa18.33■□□□□ 0.52
SEMA4D-220ENST00000492386 PTGDRQ13258 359 aa18.33■□□□□ 0.52
SEMA4D-220ENST00000492386 TERF2Q15554 542 aa18.33■□□□□ 0.52
SEMA4D-220ENST00000492386 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.52
SEMA4D-220ENST00000492386 MRFAP1Q9Y605 127 aa18.33■□□□□ 0.52
SEMA4D-220ENST00000492386 ORC4O43929 436 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 NMT2O60551 498 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 ZRANB2O95218 330 aaKnown RBP eCLIP18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 E2F4Q16254 413 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 CLEC4GQ6UXB4 293 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 NSUN4Q96CB9 384 aaKnown RBP18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 XDHP47989 1333 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 SOWAHDA6NJG2 315 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 RBL2Q08999 1139 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 IGSF22Q8N9C0 903 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
SEMA4D-220ENST00000492386 SEMA3EO15041 775 aa18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 PNMA6AP0CW24 399 aaPredicted RBP18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 KLRK1P26718 216 aa18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 CELF1Q92879 486 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 ST7Q9NRC1 585 aa18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 MECOMQ03112 1051 aa18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 DCP1AQ9NPI6 582 aaPredicted RBP18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-220ENST00000492386 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 TPM1P09493 284 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 CCDC175P0C221 793 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 KARSQ15046 597 aaKnown RBP18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 IL17AQ16552 155 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 PDXDC2PQ6P474 469 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 STAMQ92783 540 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 CTAGE1Q96RT6 745 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 ARGLU1Q9NWB6 273 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 SCG2P13521 617 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 FAM47AQ5JRC9 791 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 PPFIBP1Q86W92 1011 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 NAA15Q9BXJ9 866 aaKnown RBP18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 ADGRG1Q9Y653 693 aa18.3■□□□□ 0.52
SEMA4D-220ENST00000492386 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 TRAPPC10P48553 1259 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 PPP2R3AQ06190 1150 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 RSRC2Q7L4I2 434 aaKnown RBP18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 MTRQ99707 1265 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 CTNND2Q9UQB3 1225 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 MAST2Q6P0Q8 1798 aa18.29■□□□□ 0.52
SEMA4D-220ENST00000492386 MFAP3LO75121 409 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 CYP2D6P10635 497 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 PFKFB3Q16875 520 aaPredicted RBP18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 IQUBQ8NA54 791 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 CPLX3Q8WVH0 158 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 IRX2Q9BZI1 471 aaPredicted RBP18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 EPC1Q9H2F5 836 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 BLZF1Q9H2G9 400 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 PDS5AQ29RF7 1337 aaKnown RBP18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 MYH8P13535 1937 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 NLRP5P59047 1200 aa18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 CRNKL1Q9BZJ0 848 aaKnown RBP18.28■□□□□ 0.52
SEMA4D-220ENST00000492386 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 GYPCP04921 128 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 FILIP1LQ4L180 1135 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 ATP8A2Q9NTI2 1148 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 ITIH6Q6UXX5 1313 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 A0A0U1RQJ8 604 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 KCNQ2O43526 872 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 COBLO75128 1261 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 FECHP22830 423 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 CASP14P31944 242 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 MCM7P33993 719 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 SLC10A5Q5PT55 438 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 GPR161Q8N6U8 529 aaKnown RBP18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 ATRIPQ8WXE1 791 aa18.27■□□□□ 0.52
SEMA4D-220ENST00000492386 ZNF831Q5JPB2 1677 aa18.27■□□□□ 0.51
SEMA4D-220ENST00000492386 GTPBP6O43824 516 aaPredicted RBP18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
SEMA4D-220ENST00000492386 KRT31Q15323 416 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms