RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 ORC4O43929 436 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 HERVK_113P62684 666 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 TFAP4Q01664 338 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 USP17L24Q0WX57 530 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 CEP95Q96GE4 821 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 TRIM47Q96LD4 638 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 RPAP3Q9H6T3 665 aaPredicted RBP21.04■□□□□ 0.96
LMNB1-206ENST00000492190 VCPKMTQ9H867 229 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 TXNRD2Q9NNW7 524 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 PPP4R2Q9NY27 417 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 NYAP2Q9P242 653 aa21.04■□□□□ 0.96
LMNB1-206ENST00000492190 SGSM2O43147 1006 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 PSMC4P43686 418 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 PTH1RQ03431 593 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 BMP2KLQ5H9B9 411 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 SPICE1Q8N0Z3 855 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 MTMR4Q9NYA4 1195 aa21.03■□□□□ 0.96
LMNB1-206ENST00000492190 KIAA0100Q14667 2235 aaKnown RBP21.02■□□□□ 0.96
LMNB1-206ENST00000492190 TSPY3P0CV98 308 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 TSPY8P0CW00 308 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 GCLCP48506 637 aaPredicted RBP21.02■□□□□ 0.96
LMNB1-206ENST00000492190 PKN2Q16513 984 aaKnown RBP21.02■□□□□ 0.96
LMNB1-206ENST00000492190 FAM110CQ1W6H9 321 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 FBXO46Q6PJ61 603 aaPredicted RBP21.02■□□□□ 0.96
LMNB1-206ENST00000492190 SH2D4AQ9H788 454 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 IL17RBQ9NRM6 502 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 RBPJLQ9UBG7 517 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 PTPN22Q9Y2R2 807 aa21.02■□□□□ 0.96
LMNB1-206ENST00000492190 NMT2O60551 498 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 KIF22Q14807 665 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 AKNAD1Q5T1N1 836 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 MKL1Q969V6 931 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 MORF4L1Q9UBU8 362 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
LMNB1-206ENST00000492190 SPDYE16A6NNV3 312 aaPredicted RBP21■□□□□ 0.95
LMNB1-206ENST00000492190 RANBP6O60518 1105 aaKnown RBP21■□□□□ 0.95
LMNB1-206ENST00000492190 CNMDO75829 334 aa21■□□□□ 0.95
LMNB1-206ENST00000492190 STAG1Q8WVM7 1258 aa21■□□□□ 0.95
LMNB1-206ENST00000492190 LPAR1Q92633 364 aa21■□□□□ 0.95
LMNB1-206ENST00000492190 HPS5Q9UPZ3 1129 aa21■□□□□ 0.95
LMNB1-206ENST00000492190 NEDD4P46934 1319 aa21■□□□□ 0.95
LMNB1-206ENST00000492190 ZNFX1Q9P2E3 1918 aaKnown RBP21■□□□□ 0.95
LMNB1-206ENST00000492190 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
LMNB1-206ENST00000492190 Q3C1V9 767 aa20.99■□□□□ 0.95
LMNB1-206ENST00000492190 RRP12Q5JTH9 1297 aaKnown RBP20.99■□□□□ 0.95
LMNB1-206ENST00000492190 TANGO6Q9C0B7 1094 aa20.99■□□□□ 0.95
LMNB1-206ENST00000492190 ZNF213O14771 459 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 WDR46O15213 610 aaKnown RBP20.98■□□□□ 0.95
LMNB1-206ENST00000492190 FMNL1O95466 1100 aaPredicted RBP20.98■□□□□ 0.95
LMNB1-206ENST00000492190 TTLL1O95922 423 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 LBX2Q6XYB7 198 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 MFSD6Q6ZSS7 791 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
LMNB1-206ENST00000492190 NUP88Q99567 741 aaPredicted RBP20.98■□□□□ 0.95
LMNB1-206ENST00000492190 PAGR1Q9BTK6 254 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 GOPCQ9HD26 462 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 TOMM22Q9NS69 142 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 PTCH2Q9Y6C5 1203 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 BRCA2P51587 3418 aa20.98■□□□□ 0.95
LMNB1-206ENST00000492190 F5H6K3 240 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 NDUFB10O96000 172 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 NOVP48745 357 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 FCGRTP55899 365 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 KLRC3Q07444 240 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 ARHGEF6Q15052 776 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 FAM83BQ5T0W9 1011 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 ESYT1Q9BSJ8 1104 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 FBXO28Q9NVF7 368 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 BTBD7Q9P203 1132 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 SRRDQ9UH36 339 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 GABRQQ9UN88 632 aa20.97■□□□□ 0.95
LMNB1-206ENST00000492190 SMCHD1A6NHR9 2005 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 RAD21O60216 631 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 CAPN15O75808 1086 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 GNRH1P01148 92 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 ERVK-9P63128 1117 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 ERVK-24P63145 666 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 COG2Q14746 738 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 IMMTQ16891 758 aaKnown RBP20.96■□□□□ 0.95
LMNB1-206ENST00000492190 GPRC5AQ8NFJ5 357 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 CTNNA3Q9UI47 895 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 RABGAP1Q9Y3P9 1069 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 TAF6LQ9Y6J9 622 aa20.96■□□□□ 0.95
LMNB1-206ENST00000492190 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
LMNB1-206ENST00000492190 DSG3P32926 999 aa20.95■□□□□ 0.94
LMNB1-206ENST00000492190 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
LMNB1-206ENST00000492190 MAP4K1Q92918 833 aa20.95■□□□□ 0.94
LMNB1-206ENST00000492190 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
LMNB1-206ENST00000492190 PORCNQ9H237 461 aa20.95■□□□□ 0.94
LMNB1-206ENST00000492190 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
LMNB1-206ENST00000492190 FLOT1O75955 427 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 CYP21A2P08686 494 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 PRKCZQ05513 592 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 RCSD1Q6JBY9 416 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 RASGRP2Q7LDG7 609 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 GMCL1P1Q8NEA9 526 aa20.94■□□□□ 0.94
LMNB1-206ENST00000492190 ATG4CQ96DT6 458 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms