RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 ABCB6Q9NP58 842 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 SPATA31A3Q5VYP0 1347 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 PCP11498 1178 aaKnown RBP11.65□□□□□ -0.54
SREBF2-208ENST00000491541 SMTNP53814 917 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 CBLBQ13191 982 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 ABHD10Q9NUJ1 306 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 AKR1B15C9JRZ8 316 aaPredicted RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 PHACTR2O75167 634 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 NOVP48745 357 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 SLC52A2Q9HAB3 445 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 LY9Q9HBG7 655 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 BMP15O95972 392 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 HAUS4Q9H6D7 363 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 RANBP6O60518 1105 aaKnown RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 WDR59Q6PJI9 974 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 CRELD2Q6UXH1 353 aaPredicted RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 VPS18Q9P253 973 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 H0YGN5 161 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 TTC31Q49AM3 519 aaPredicted RBP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 SPDYAQ5MJ70 313 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 EMBQ6PCB8 327 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 FTOQ9C0B1 505 aaKnown RBP eCLIP11.64□□□□□ -0.55
SREBF2-208ENST00000491541 SIL1Q9H173 461 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 NFS1Q9Y697 457 aa11.64□□□□□ -0.55
SREBF2-208ENST00000491541 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 IRF2BP1Q8IU81 584 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
SREBF2-208ENST00000491541 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
SREBF2-208ENST00000491541 DOCK5Q9H7D0 1870 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 SIPA1L1O43166 1804 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 M0R2C6 588 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 XRCC4Q13426 336 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 HSP90B2PQ58FF3 399 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 SECISBP2LQ93073 1101 aaKnown RBP11.63□□□□□ -0.55
SREBF2-208ENST00000491541 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 PDLIM1O00151 329 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 CDKL5O76039 1030 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 FGFR2P21802 821 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 APLFQ8IW19 511 aaPredicted RBP11.63□□□□□ -0.55
SREBF2-208ENST00000491541 DAGLBQ8NCG7 672 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
SREBF2-208ENST00000491541 MARSP56192 900 aaKnown RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 HERVK_113P62684 666 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 POSTNQ15063 836 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 LONRF3Q496Y0 759 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 PPP4R3AQ6IN85 833 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 CCDC91Q7Z6B0 441 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 FANCLQ9NW38 375 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 FAM184BQ9ULE4 1060 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 GRID2IPA4D2P6 1211 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 DNAJC8O75937 253 aaPredicted RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 IRAK1P51617 712 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 PLEKHO1Q53GL0 409 aaPredicted RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 RILPL1Q5EBL4 403 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 DPY19L2P1Q6NXN4 242 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 APPBP2Q92624 585 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 ANKS1AQ92625 1134 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 NAPGQ99747 312 aaPredicted RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 PHF20Q9BVI0 1012 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 THAP9Q9H5L6 903 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 SERPINC1P01008 464 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 SLC8A3P57103 927 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 EHHADHQ08426 723 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 SART3Q15020 963 aaKnown RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 EBF2Q9HAK2 575 aa11.62□□□□□ -0.55
SREBF2-208ENST00000491541 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
SREBF2-208ENST00000491541 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
SREBF2-208ENST00000491541 ERCC3P19447 782 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 GNG11P61952 73 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 DNAJC21Q5F1R6 531 aaKnown RBP11.61□□□□□ -0.55
SREBF2-208ENST00000491541 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 PDE11AQ9HCR9 933 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 PCDHA5Q9Y5H7 936 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 MGRN1O60291 552 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
SREBF2-208ENST00000491541 SYKP43405 635 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 GRIK3Q13003 919 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 HSP90AA4PQ58FG1 418 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 KRI1Q8N9T8 703 aaKnown RBP11.61□□□□□ -0.55
SREBF2-208ENST00000491541 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 ANXA13P27216 316 aa11.61□□□□□ -0.55
SREBF2-208ENST00000491541 LMOD1P29536 600 aaPredicted RBP11.61□□□□□ -0.55
SREBF2-208ENST00000491541 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms