RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ERVFC1P60507 584 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 TAGLNQ01995 201 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 LMNB2Q03252 620 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 SEZ6Q53EL9 994 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 GK5Q6ZS86 529 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 HS2ST1Q7LGA3 356 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ZNF605Q86T29 641 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 TMEM87AQ8NBN3 555 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 FBXO15Q8NCQ5 510 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 FLAD1Q8NFF5 587 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ANKRD24Q8TF21 1146 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 GIPC2Q8TF65 315 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 EPB41L4BQ9H329 900 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 KCNK12Q9HB15 430 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 GPR160Q9UJ42 338 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 TMEM59LQ9UK28 342 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 PCDHB14Q9Y5E9 798 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ST14Q9Y5Y6 855 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 SCRIBQ14160 1630 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 WRNQ14191 1432 aaPredicted RBP eCLIP2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 EEA1Q15075 1411 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 CLSPNQ9HAW4 1339 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 MROH2BQ7Z745 1585 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 ZNF503-AS2A6NEH8 195 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 FKTNO75072 461 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 HTR3BO95264 441 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 EIF4A3P38919 411 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 CAP2P40123 477 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 DUSP4Q13115 394 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 ARSHQ5FYA8 562 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 ATG14Q6ZNE5 492 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 WAPLQ7Z5K2 1190 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 CCDC84Q86UT8 332 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 USP48Q86UV5 1035 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 FBXO27Q8NI29 283 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 CYB5D2Q8WUJ1 264 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 CRELD1Q96HD1 420 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 KREMEN1Q96MU8 473 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 RSRP1Q9BUV0 290 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 DUSP15Q9H1R2 295 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 BRMS1Q9HCU9 246 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 KBTBD4Q9NVX7 518 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 SUPT16HQ9Y5B9 1047 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 PCDHA11Q9Y5I1 949 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 WIZO95785 1651 aa2.92□□□□□ -1.94
SNRNP40-207ENST00000491106 NPIPB6E9PJ23 425 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 RBAK-RBAKDNI3L0D1 243 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 CILPO75339 1184 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 CTSHP09668 335 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 C1QTNF9P0C862 333 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 PCBP3P57721 371 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 APOBRQ0VD83 1088 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 MPP2Q14168 576 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 NOL9Q5SY16 702 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 CIAPIN1Q6FI81 312 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 TSPYL5Q86VY4 417 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 DTWD2Q8NBA8 298 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 RGS22Q8NE09 1264 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 PPP1R13LQ8WUF5 828 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 ZNF296Q8WUU4 475 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 RNF141Q8WVD5 230 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 NKD1Q969G9 470 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 DSCC1Q9BVC3 393 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 MKRN2Q9H000 416 aaKnown RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 COPRSQ9NQ92 184 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 SIRT5Q9NXA8 310 aa2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 BAZ1AQ9NRL2 1556 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-207ENST00000491106 FITM1A5D6W6 292 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 NUAK1O60285 661 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CLEC3AO75596 197 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ESR1P03372 595 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 SYPP08247 313 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ZSCAN22P10073 491 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF165P49910 485 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 GALK1P51570 392 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 RNF4P78317 190 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 NMIQ13287 307 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ADGRF1Q5T601 910 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 TMCO4Q5TGY1 634 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CWF19L1Q69YN2 538 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 FBXL19Q6PCT2 694 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CEP128Q6ZU80 1094 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 C22orf34Q6ZV56 151 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 REC114Q7Z4M0 266 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 WFDC3Q8IUB2 231 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CCDC144CPQ8IYA2 1237 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 LRRC56Q8IYG6 542 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 NAT16Q8N8M0 369 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 PDZD8Q8NEN9 1154 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF512BQ96KM6 892 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 Q96M66 194 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 FERD3LQ96RJ6 166 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 SLC26A8Q96RN1 970 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CRBNQ96SW2 442 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 CDADC1Q9BWV3 514 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 GPR62Q9BZJ7 368 aa2.9□□□□□ -1.95
SNRNP40-207ENST00000491106 FOXP3Q9BZS1 431 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 536.8 ms