RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GOLGA6L10A0A0M3HER8 536 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 FRMD3A2A2Y4 597 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 PRKAB2O43741 272 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 NAPAP54920 295 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 PANX2Q96RD6 677 aa14.34□□□□□ -0.11
SHOX2-205ENST00000490689 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
SHOX2-205ENST00000490689 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.34□□□□□ -0.11
SHOX2-205ENST00000490689 MROH7-TTC4A0A0A0MT08 1334 aa14.33□□□□□ -0.11
SHOX2-205ENST00000490689 PTPRMP28827 1452 aa14.33□□□□□ -0.11
SHOX2-205ENST00000490689 CPS1P31327 1500 aa14.33□□□□□ -0.11
SHOX2-205ENST00000490689 BICDL2A1A5D9 508 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 SASH3O75995 380 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 NDUFA10O95299 355 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 GGCXP38435 758 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 CEP85LQ5SZL2 805 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 USP49Q70CQ1 688 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 TC2NQ8N9U0 490 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 ALDH8A1Q9H2A2 487 aaPredicted RBP14.33□□□□□ -0.12
SHOX2-205ENST00000490689 ADGRB1O14514 1584 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 ADGRB2O60241 1585 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
SHOX2-205ENST00000490689 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
SHOX2-205ENST00000490689 IFT88Q13099 833 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 KRT31Q15323 416 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 FUT8Q9BYC5 575 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 SHPRHQ149N8 1683 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 TRAF5O00463 557 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 CYB5R4Q7L1T6 521 aa14.33□□□□□ -0.12
SHOX2-205ENST00000490689 MED23Q9ULK4 1368 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 H3BQF6 201 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 PDCLQ13371 301 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 NOA1Q8NC60 698 aaKnown RBP14.32□□□□□ -0.12
SHOX2-205ENST00000490689 SIRT1Q96EB6 747 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 LCMT1Q9UIC8 334 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
SHOX2-205ENST00000490689 GUCY2DQ02846 1103 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 TADA2BQ86TJ2 420 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 TNKSO95271 1327 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 SNAP23O00161 211 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 MMP1P03956 469 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 CALML3P27482 149 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
SHOX2-205ENST00000490689 TBC1D10CQ8IV04 446 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 MCM9Q9NXL9 1143 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 BAIAP2L1Q9UHR4 511 aa14.32□□□□□ -0.12
SHOX2-205ENST00000490689 TMEM2Q9UHN6 1383 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 CEP104O60308 925 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 PARP1P09874 1014 aaKnown RBP14.31□□□□□ -0.12
SHOX2-205ENST00000490689 ATP6V1AP38606 617 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 SPATA5Q8NB90 893 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 GSTTP1A0A1W2PQM5 241 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 RPN1P04843 607 aaKnown RBP14.31□□□□□ -0.12
SHOX2-205ENST00000490689 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
SHOX2-205ENST00000490689 TNNC1P63316 161 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 NOX5Q96PH1 765 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 PNKPQ96T60 521 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 TBC1D7Q9P0N9 293 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 TFR2Q9UP52 801 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 FAM169AQ9Y6X4 670 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 PPRC1Q5VV67 1664 aaKnown RBP14.31□□□□□ -0.12
SHOX2-205ENST00000490689 KRT13P13646 458 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 GNAT2P19087 354 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
SHOX2-205ENST00000490689 CCDC25Q86WR0 208 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
SHOX2-205ENST00000490689 PHKG2P15735 406 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TXKP42681 527 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 GRIN1Q05586 938 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 SCARF1Q14162 830 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 E2F5Q15329 346 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 CTNNBL1Q8WYA6 563 aaPredicted RBP14.3□□□□□ -0.12
SHOX2-205ENST00000490689 RPGRIP1Q96KN7 1286 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TCEAL9Q9UHQ7 104 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 DENND2AQ9ULE3 1009 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 VIMP08670 466 aaKnown RBP14.3□□□□□ -0.12
SHOX2-205ENST00000490689 PTPREP23469 700 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 ARHGAP25P42331 645 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 FXR1P51114 621 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms