RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 TMX2Q9Y320 296 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 SNCAIPQ9Y6H5 919 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 GNAQP50148 359 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 PPATQ06203 517 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 TROAPQ12815 778 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 ME3Q16798 604 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 ERO1BQ86YB8 467 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 ZNF280CQ8ND82 737 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 DCAF4Q8WV16 495 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 FEZ1Q99689 392 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
SNX12-205ENST00000490561 SPDYE5A6NIY4 337 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 CDKL5O76039 1030 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 RTN1Q16799 776 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
SNX12-205ENST00000490561 ASPRV1Q53RT3 343 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 SIAH1Q8IUQ4 282 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
SNX12-205ENST00000490561 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 LPAR1Q92633 364 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 GTF3C6Q969F1 213 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 SENP2Q9HC62 589 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 ZHX2Q9Y6X8 837 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 TRPM7Q96QT4 1865 aa15.45■□□□□ 0.06
SNX12-205ENST00000490561 UBE2Q2LH0YL09 131 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 PARP1P09874 1014 aaKnown RBP15.44■□□□□ 0.06
SNX12-205ENST00000490561 SNHG28P0DPA3 235 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 PPIL2Q13356 520 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 CUL4AQ13619 759 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 GRM4Q14833 912 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 GPATCH4Q5T3I0 446 aaKnown RBP15.44■□□□□ 0.06
SNX12-205ENST00000490561 SLFN13Q68D06 897 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 FANCBQ8NB91 859 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 SLC10A4Q96EP9 437 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
SNX12-205ENST00000490561 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 LLPHQ9BRT6 129 aaKnown RBP15.44■□□□□ 0.06
SNX12-205ENST00000490561 VCPKMTQ9H867 229 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 ELP3Q9H9T3 547 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.44■□□□□ 0.06
SNX12-205ENST00000490561 OTOFQ9HC10 1997 aa15.44■□□□□ 0.06
SNX12-205ENST00000490561 F5H6K3 240 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 CXCL11O14625 94 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 CPLX1O14810 134 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 HSP90AA1P07900 732 aaKnown RBP15.43■□□□□ 0.06
SNX12-205ENST00000490561 BACE1P56817 501 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 KLRC3Q07444 240 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 STK3Q13188 491 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 CST9Q5W186 159 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 ACER1Q8TDN7 264 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 LARP6Q9BRS8 491 aaKnown RBP15.43■□□□□ 0.06
SNX12-205ENST00000490561 HPS5Q9UPZ3 1129 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 AFG3L2Q9Y4W6 797 aa15.43■□□□□ 0.06
SNX12-205ENST00000490561 A0A1W2PRG0 241 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 PDHBP11177 359 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 SMARCA1P28370 1054 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 ECE1P42892 770 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 SLC1A4P43007 532 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 FMR1Q06787 632 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNX12-205ENST00000490561 SCRN1Q12765 414 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 SPP2Q13103 211 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 SH3D19Q5HYK7 790 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 MOB2Q70IA6 237 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 MYL10Q9BUA6 226 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 TMOD4Q9NZQ9 345 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 MYH4Q9Y623 1939 aa15.42■□□□□ 0.06
SNX12-205ENST00000490561 PALM3A6NDB9 673 aaPredicted RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 TMEM88BA6NKF7 163 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 WDR46O15213 610 aaKnown RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 LARGE1O95461 756 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 NDUFB10O96000 172 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 ZBTB48P10074 688 aaPredicted RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 BMP3P12645 472 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 HUNKP57058 714 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 CCT2P78371 535 aaKnown RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 HMGN5P82970 282 aaKnown RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 MTMR2Q13614 643 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 CCDC83Q8IWF9 413 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 OPTNQ96CV9 577 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 CLMNQ96JQ2 1002 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 RBM27Q9P2N5 1060 aaKnown RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
SNX12-205ENST00000490561 KCNH4Q9UQ05 1017 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 KIF3AQ9Y496 699 aa15.41■□□□□ 0.06
SNX12-205ENST00000490561 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
SNX12-205ENST00000490561 RAD21O60216 631 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms