RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 CSADQ9Y600 493 aa15.63■□□□□ 0.09
TRAIP-210ENST00000489948 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
TRAIP-210ENST00000489948 ZKSCAN4Q969J2 545 aaPredicted RBP15.62■□□□□ 0.09
TRAIP-210ENST00000489948 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
TRAIP-210ENST00000489948 GBA2Q9HCG7 927 aaPredicted RBP15.62■□□□□ 0.09
TRAIP-210ENST00000489948 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
TRAIP-210ENST00000489948 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
TRAIP-210ENST00000489948 SPDYE5A6NIY4 337 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 CELF2O95319 508 aaKnown RBP15.61■□□□□ 0.09
TRAIP-210ENST00000489948 METAP2P50579 478 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAIP-210ENST00000489948 ST3GAL1Q11201 340 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 FSTL1Q12841 308 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 NOL8Q76FK4 1167 aaKnown RBP15.61■□□□□ 0.09
TRAIP-210ENST00000489948 MICU3Q86XE3 530 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
TRAIP-210ENST00000489948 KIAA1683Q9H0B3 1180 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
TRAIP-210ENST00000489948 CLIP2Q9UDT6 1046 aa15.61■□□□□ 0.09
TRAIP-210ENST00000489948 CCDC196A0A1B0GTZ2 297 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 GOLGA8AA7E2F4 631 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
TRAIP-210ENST00000489948 PDHBP11177 359 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 SCRN1Q12765 414 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 PRKG1Q13976 671 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 TTLL12Q14166 644 aaPredicted RBP15.6■□□□□ 0.09
TRAIP-210ENST00000489948 GRM4Q14833 912 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
TRAIP-210ENST00000489948 DCAF4Q8WV16 495 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 SLKQ9H2G2 1235 aaPredicted RBP15.6■□□□□ 0.09
TRAIP-210ENST00000489948 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 GOPCQ9HD26 462 aa15.6■□□□□ 0.09
TRAIP-210ENST00000489948 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.6■□□□□ 0.09
TRAIP-210ENST00000489948 PARP14Q460N5 1801 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 KIF5BP33176 963 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ECE1P42892 770 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 USP14P54578 494 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 PPATQ06203 517 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 FMR1Q06787 632 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRAIP-210ENST00000489948 RTN1Q16799 776 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 CST9Q5W186 159 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ERO1BQ86YB8 467 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 C2orf69Q8N8R5 385 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 FANCBQ8NB91 859 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ZNF280CQ8ND82 737 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 LPAR1Q92633 364 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 C12orf42Q96LP6 360 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 LARP6Q9BRS8 491 aaKnown RBP15.59■□□□□ 0.09
TRAIP-210ENST00000489948 LLPHQ9BRT6 129 aaKnown RBP15.59■□□□□ 0.09
TRAIP-210ENST00000489948 MYL10Q9BUA6 226 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 ZNF408Q9H9D4 720 aa15.59■□□□□ 0.09
TRAIP-210ENST00000489948 USP17L10C9JJH3 530 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 NDUFB10O96000 172 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 ATP2B2Q01814 1243 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 PPIL2Q13356 520 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 GPATCH4Q5T3I0 446 aaKnown RBP15.58■□□□□ 0.08
TRAIP-210ENST00000489948 MOB2Q70IA6 237 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
TRAIP-210ENST00000489948 KCNH4Q9UQ05 1017 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 AFG3L2Q9Y4W6 797 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 MYH6P13533 1939 aa15.58■□□□□ 0.08
TRAIP-210ENST00000489948 PALM3A6NDB9 673 aaPredicted RBP15.57■□□□□ 0.08
TRAIP-210ENST00000489948 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 F5H6K3 240 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 CDKL5O76039 1030 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 SMARCA1P28370 1054 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 GNAQP50148 359 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 BACE1P56817 501 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 KLRC3Q07444 240 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 ZNF543Q08ER8 600 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 STK3Q13188 491 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 SH3D19Q5HYK7 790 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 NUP133Q8WUM0 1156 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
TRAIP-210ENST00000489948 FEZ1Q99689 392 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
TRAIP-210ENST00000489948 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.57■□□□□ 0.08
TRAIP-210ENST00000489948 ZHX2Q9Y6X8 837 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 STK36Q9NRP7 1315 aa15.57■□□□□ 0.08
TRAIP-210ENST00000489948 UBE2Q2LH0YL09 131 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 CXCL11O14625 94 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 WDR46O15213 610 aaKnown RBP15.56■□□□□ 0.08
TRAIP-210ENST00000489948 PARP1P09874 1014 aaKnown RBP15.56■□□□□ 0.08
TRAIP-210ENST00000489948 IFNAR1P17181 557 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 RXRAP19793 462 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 CDC27P30260 824 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 CCT2P78371 535 aaKnown RBP15.56■□□□□ 0.08
TRAIP-210ENST00000489948 MTMR2Q13614 643 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 NTRK3Q16288 839 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
TRAIP-210ENST00000489948 CPLX2Q6PUV4 134 aaKnown RBP15.56■□□□□ 0.08
TRAIP-210ENST00000489948 CCDC84Q86UT8 332 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms