RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 VCAM1P19320 739 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 IMMTQ16891 758 aaKnown RBP9.31□□□□□ -0.92
SSR1-210ENST00000489567 COL13A1Q5TAT6 717 aaPredicted RBP9.31□□□□□ -0.92
SSR1-210ENST00000489567 POTEEQ6S8J3 1075 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 SPICE1Q8N0Z3 855 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 ASCC2Q9H1I8 757 aaPredicted RBP9.31□□□□□ -0.92
SSR1-210ENST00000489567 ZFYVE28Q9HCC9 887 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 TOMM22Q9NS69 142 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 TMOD4Q9NZQ9 345 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 CPA4Q9UI42 421 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 CTNNA3Q9UI47 895 aa9.31□□□□□ -0.92
SSR1-210ENST00000489567 RBM8AQ9Y5S9 174 aaKnown RBP9.31□□□□□ -0.92
SSR1-210ENST00000489567 TSPY2A6NKD2 308 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 PEX10O60683 326 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 ANO2Q9NQ90 1003 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 NYAP2Q9P242 653 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 SLC45A1Q9Y2W3 748 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 CASP8AP2Q9UKL3 1982 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 B4E1Z4 1266 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 HOXA7P31268 230 aaPredicted RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 USP14P54578 494 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 C17orf99Q6UX52 265 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 STOX1Q6ZVD7 989 aa9.3□□□□□ -0.92
SSR1-210ENST00000489567 LRRC47Q8N1G4 583 aaKnown RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 PARK7Q99497 189 aaKnown RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 P2RX7Q99572 595 aaKnown RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 RPAP3Q9H6T3 665 aaPredicted RBP9.3□□□□□ -0.92
SSR1-210ENST00000489567 KDM4AO75164 1064 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
SSR1-210ENST00000489567 TTLL1O95922 423 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 BCRP11274 1271 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 NOVP48745 357 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 NECTIN1Q15223 517 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 RASGRP2Q7LDG7 609 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 MKL1Q969V6 931 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 NUP88Q99567 741 aaPredicted RBP9.29□□□□□ -0.92
SSR1-210ENST00000489567 ZKSCAN3Q9BRR0 538 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 RNF41Q9H4P4 317 aaPredicted RBP9.29□□□□□ -0.92
SSR1-210ENST00000489567 ZSWIM5Q9P217 1185 aa9.29□□□□□ -0.92
SSR1-210ENST00000489567 F5H6K3 240 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 SLC27A2O14975 620 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 RAD21O60216 631 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 FKTNO75072 461 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 NDUFB10O96000 172 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
SSR1-210ENST00000489567 CTGFP29279 349 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 SP3Q02447 781 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 KLRC3Q07444 240 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 RCSD1Q6JBY9 416 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 CASC1Q6TDU7 716 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 CATSPERGQ6ZRH7 1159 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 CD99L2Q8TCZ2 262 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 SMCR8Q8TEV9 937 aaPredicted RBP9.28□□□□□ -0.92
SSR1-210ENST00000489567 CHMP4CQ96CF2 233 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 ARHGAP39Q9C0H5 1083 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 TXNRD2Q9NNW7 524 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 ZSWIM8A7E2V4 1837 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 E7EWF7 191 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 OSBPP22059 807 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 HERVK_113P62684 666 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
SSR1-210ENST00000489567 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSR1-210ENST00000489567 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 CYB5R4Q7L1T6 521 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 LPAR1Q92633 364 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 ESR2Q92731 530 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 TCP11L1Q9NUJ3 509 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 PNMA3Q9UL41 463 aa9.28□□□□□ -0.92
SSR1-210ENST00000489567 HTTP42858 3142 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 MYH4Q9Y623 1939 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 SPDYE16A6NNV3 312 aaPredicted RBP9.27□□□□□ -0.93
SSR1-210ENST00000489567 LACTBP83111 547 aaPredicted RBP9.27□□□□□ -0.93
SSR1-210ENST00000489567 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 TMEM47Q9BQJ4 181 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 RBPJLQ9UBG7 517 aa9.27□□□□□ -0.93
SSR1-210ENST00000489567 RLFQ13129 1914 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms